Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1675 ATGCTTGCAAGCTTGAACTTGAAATCCGAAGAATCAAGCGGCCAGATGCAGCTGGTCGAACGTGAAGACATGGAAGATGAAGCTATCGACAAGCTGATTTTTCAAGGAATTAATGCCGGAGATGTAAAGAAGCTTCAGGACGCAGGGATCTTTATCTGCAATGGCTTGATGATGCACACGAAGAAGAATTTGACTGGAATCACAGGTTTATCTGAGGCGAAGGTTGATAAAATCTGTGAAGCTGCTGAGAAGCTTGTGTTTGTGAAGTTATCAGAGGATAGTTCTGTTTGTAACGAAGCTTTATTGTTGATAGGGCTTCGAATGCAACTTCGGTTGCTGAAGTTGGAATCTGAAGAACATTTGGAGGGACGTATGCTAGTTTCAAGTGATGAAGATGGTGTGGAAGTATCTTCTGAAATGTTAGAAGGCAATGCATTATGGAGAACTGAAGATGACTGGGAGTCATCTTACATTATTGATGTCTTGTCTGAAGCTCAAACTGATAATAATTTAGTTTGGCAATCTCTAGAATGCCCTGTGAGTGTTTCTGTGTTTGAAGATCTGGAAGAGTGGTGCAGTGATTTGACTACTTGTTCAAGGTCTGAAAGGAGATTGCTTTTCGACCGCATCAATTCAGGAATTGTTATGATTCATGAGCAATCTACTGATCCACAGCCATGGGTGAGAAATGCAGCCAAACATTTTGGACCAACAAGGATTAACGGGCTTCAGGATGCTCTTTTCCAGATGCTAGGGAACCAAGGAAAGGTAGAGGATGATGTCCTGCGTAAGGAGTCTCGGTGGTTGAAGTTGAGTGATGACATTGATGTAATAGGCATAGAAGTTGAGAGAATGATACTAGATGATTTTGTGGCAGAAATAGCCGGTATCTAG 894 0.4195 MLASLNLKSEESSGQMQLVEREDMEDEAIDKLIFQGINAGDVKKLQDAGIFICNGLMMHTKKNLTGITGLSEAKVDKICEAAEKLVFVKLSEDSSVCNEALLLIGLRMQLRLLKLESEEHLEGRMLVSSDEDGVEVSSEMLEGNALWRTEDDWESSYIIDVLSEAQTDNNLVWQSLECPVSVSVFEDLEEWCSDLTTCSRSERRLLFDRINSGIVMIHEQSTDPQPWVRNAAKHFGPTRINGLQDALFQMLGNQGKVEDDVLRKESRWLKLSDDIDVIGIEVERMILDDFVAEIAGI* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1675 297 Pfam Domain of unknown function (DUF4378) 155 293 IPR025486 -
Mtr5g1675 297 Gene3D - 6 87 - -
Mtr5g1675 297 PANTHER AFADIN 94 295 - -
Mtr5g1675 297 PANTHER AFADIN 94 295 - -
Mtr5g1675 297 SUPERFAMILY Rad51 N-terminal domain-like 23 87 IPR010995 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1675 Mtr-Chr5 18478963 18480366 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g1675 103 294 TRM (TON1 Recruiting Motif) Superfamily AT3G53540 39.320 1.30e-34 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1675 - - mtr:MTR_5g042180 536.184