Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1669 ATGGAACTCCCACCTGGCTTTAGGTTTCATCCAACTGATGAGGAGCTAATTGTGTATTATCTTTGTAATCAAGCAACATCACAACCATGTCCTGCATCTATCATTCCAGAAGTTGATATCTATAAATTTGATCCATGGGAATTACCAGATAAATCAGGCTTTGGAGAAAATGAATGGTATTTTTTTACTCCAAGAGAAAGAAAGTATCCAAATGGGGTGAGACCAAATAGAGCAACTGTTTCTGGTTATTGGAAAGCTACTGGAACAGATAAATCAATCTTTAGTGGGTCTAAGCATATTGGAGTTAAGAAAGCTTTGGTATTTTACAAGGGTAGACCACCAAAGGGAATCAAGACAGATTGGATTATGCATGAATATAGGTTAATTGGATCAAGAAGACAAGCTAATAGACAAATTGGGTCCATGAGGCTAGATGATTGGGTCTTATGTAGGATCTATAAGAAGAAGAACATCACAAAATCATTGGAGACAAATGAAGACTACCCAACAAATCAAATCAACATGACACAAACAAATGATGATAATGAACAAGAATTAGTGAAATTTCCAAGGACATGTTCTCTTACTAATCTTTTGGATATGGATTATATGGGACCAATATCACAAATATTATCAGATGGATCATATAATTCAACCTTTGAATTTCAAATTAATACAGCACATGGTGGAACAATAGACCCCACTTATGCAGCTGGTTTAGAGAAGTACAATGTGAAACAAAATAGCAGCTTTGGGAACCAAGTATTTGATCAAAGGGAATAA 783 0.3525 MELPPGFRFHPTDEELIVYYLCNQATSQPCPASIIPEVDIYKFDPWELPDKSGFGENEWYFFTPRERKYPNGVRPNRATVSGYWKATGTDKSIFSGSKHIGVKKALVFYKGRPPKGIKTDWIMHEYRLIGSRRQANRQIGSMRLDDWVLCRIYKKKNITKSLETNEDYPTNQINMTQTNDDNEQELVKFPRTCSLTNLLDMDYMGPISQILSDGSYNSTFEFQINTAHGGTIDPTYAAGLEKYNVKQNSSFGNQVFDQRE* 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1669 260 PANTHER NAC DOMAIN-CONTAINING PROTEIN 1 2 226 - -
Mtr5g1669 260 Pfam No apical meristem (NAM) protein 4 128 IPR003441 GO:0003677|GO:0006355
Mtr5g1669 260 ProSiteProfiles NAC domain profile. 3 155 IPR003441 GO:0003677|GO:0006355
Mtr5g1669 260 Gene3D NAC domain 12 160 IPR036093 GO:0003677|GO:0006355
Mtr5g1669 260 PANTHER NAC TRANSCRIPTION FACTOR 56 2 226 - -
Mtr5g1669 260 SUPERFAMILY NAC domain 2 155 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1669 Mtr-Chr5 18352404 18354061 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g1669 3 210 NAC Transcription Factor Family AT1G69490 67.727 1.34e-111 320
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mtr5g1669 NAM 5.1e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1669 - - gmx:732552 445.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g1669 5 18352404 18354061 Mtr5g1669 5 18352404 18354061 ECH