Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1659 ATGGCGATAATTGAACTATATCCCAAATTCCTCTTCTCTCAAAACCCAATCCCAAAACCCTTCTTAAACCCTAATTTCAATCCCAAATCTTATCAAATCTTCAATTTCAAACCAATTTCTCAATTTTCCCATCAATCAACAACCACCACCCCCAATCGTGGCTTAATTTTCAGAGAAAAAGTTCTATACCTTGAGAAACTCAAAGTAAACCCAGAAAAAGCCTTCAAACAAAACCCTAATCTTCGTTCTTGTCCTTTAAGAACCCTAAAATCTGTAGAACAATGTCTTTCATCAATTGGCATACACAGAAGCCAAATGGGTCGAATTCTTGATATGCTTCCTGAACTTCTCACGTGTGAACCGTATAGTGATATTTACCCCCTTCTTGATTTTCTTCTCAATGAGGTTGAAATTCCTTACCATGATGTTCACAAATCGATCTTGCGGTGTCCTAGATTGTTGGTTAGTAGTGTAGAGAATCGATTAAGACCTGCTCTGTGTTTTTTGAGGGAATTAGGGTTTGTTGGGCCCCACTCTCTCACGTGCCAGACCACATTGCTTTTGGTTTCGAGTGTTGAGGATACCCTTTTGCCTAAAGTTGAGTTTTTGATGGGTTTGGGGTTCACACGTGTGGAGGTTTCGAATATGGTTGTGAGGTCACCTGGGTTATTGACTTTTAGTGTGGATAAGAATTTGGCTCCTAAATTTGAGTTTTTCTTGAAGGAGATGAATGGTGATGTTGCTGAGTTGAAGAGGTTTCCTCAGTATTTCTCTTTTAGCTTGGAAGGGAGGATTAAACCGAGGCACGCGATGTTGGTTCGGCTTGGATTGTCGCTTTCTTTGCAAGAGATGTTGCAGGTTAGTGATGGTGGTTTTGATTCAAGATTGCTTGAATTGCGGTTAAAGGAACTTGAGGGAAGATAA 924 0.4015 MAIIELYPKFLFSQNPIPKPFLNPNFNPKSYQIFNFKPISQFSHQSTTTTPNRGLIFREKVLYLEKLKVNPEKAFKQNPNLRSCPLRTLKSVEQCLSSIGIHRSQMGRILDMLPELLTCEPYSDIYPLLDFLLNEVEIPYHDVHKSILRCPRLLVSSVENRLRPALCFLRELGFVGPHSLTCQTTLLLVSSVEDTLLPKVEFLMGLGFTRVEVSNMVVRSPGLLTFSVDKNLAPKFEFFLKEMNGDVAELKRFPQYFSFSLEGRIKPRHAMLVRLGLSLSLQEMLQVSDGGFDSRLLELRLKELEGR* 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1659 307 SMART mt_12 178 209 IPR003690 GO:0003690|GO:0006355
Mtr5g1659 307 SMART mt_12 72 102 IPR003690 GO:0003690|GO:0006355
Mtr5g1659 307 SMART mt_12 144 175 IPR003690 GO:0003690|GO:0006355
Mtr5g1659 307 SMART mt_12 214 246 IPR003690 GO:0003690|GO:0006355
Mtr5g1659 307 SMART mt_12 247 278 IPR003690 GO:0003690|GO:0006355
Mtr5g1659 307 SMART mt_12 107 139 IPR003690 GO:0003690|GO:0006355
Mtr5g1659 307 PANTHER CGI-12 PROTEIN-RELATED 39 305 IPR003690 GO:0003690|GO:0006355
Mtr5g1659 307 Pfam mTERF 142 292 IPR003690 GO:0003690|GO:0006355
Mtr5g1659 307 Pfam mTERF 73 174 IPR003690 GO:0003690|GO:0006355
Mtr5g1659 307 Gene3D Transcription termination factor 3, mitochondrial 72 305 IPR038538 -
Mtr5g1659 307 PANTHER TRANSCRIPTION TERMINATION FACTOR MTEF1, CHLOROPLASTIC 39 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1659 Mtr-Chr5 18201017 18202837 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Mtr5g1659 mTERF 5.9e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1659 K15032 - gmx:100785219 381.333