Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1654 ATGGAGGATCAAAACATGGAACTTCAACTTACTCTTTCACTGGGTTCAATCCCAAAACGGTCCGAAACAATCAACAACGCTCCCGATGTGATAAAAATTTTCGGAGTTGATGTTGATTTAATCACTGGAGCAAAGTCGGGGGGTTCGAACTCTGAACAAGTGCAAAGGGGGGAGGGGAGGCCTCCAAAGTACGGAGTTAGTAGGAGCCCGTTTTCTCCAATGACGCCTCCTTCAGGGCTTGCTACTAGTCACTCTAATGAAAGTGAGGAGAAGGATGGAAATGGACGATCTGGAGGATCATTAGTTTCCACTGATGGATTTGTTGAAGAAACGACCGGAGAAAGCATTACACCTTATGTATTGATTGTGAACCCTCGAGAGAATGTGGTTGAAAAGATATCAGCATTTTTTAAGAATGGTCCTCGACAAGCTGTTTGCATACTTGCTGCTACAGGAGCTGTATCAAATGTCACCCTTTACCAACCTGGTGTTTCTGATGGTTTTTTAAGATATGAGGGCCACTTTCCTATTCTATCTTTAAATGGACCATGCACCTTCCCTGGTGGTTGTGCACAGAAGGAAATTGAAATGATGAGTGTTTCCTTGTCTAAACCTGATGGCAGTATTTTTGGAGGTGGTATTGGTAGATCAATGATAGCTGCTACTCCTATTCATATTGTTTTGGGAACTTTCGATATGGTAATTACAGACGGTGAACCTAGCAACCTAGCAACAACAAGTGCTAATGGTGCATCAATGTCAGATAATGTCACTGTTGTTGGAGAACCTAGCAACCTGGAAAAGTTTCCATATCTTGATCTCAATCGTCCCCCAGAAGAAATATGA 846 0.4267 MEDQNMELQLTLSLGSIPKRSETINNAPDVIKIFGVDVDLITGAKSGGSNSEQVQRGEGRPPKYGVSRSPFSPMTPPSGLATSHSNESEEKDGNGRSGGSLVSTDGFVEETTGESITPYVLIVNPRENVVEKISAFFKNGPRQAVCILAATGAVSNVTLYQPGVSDGFLRYEGHFPILSLNGPCTFPGGCAQKEIEMMSVSLSKPDGSIFGGGIGRSMIAATPIHIVLGTFDMVITDGEPSNLATTSANGASMSDNVTVVGEPSNLEKFPYLDLNRPPEEI* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1654 281 Gene3D - 118 246 - -
Mtr5g1654 281 CDD DUF296 117 231 IPR005175 -
Mtr5g1654 281 ProSiteProfiles PPC domain profile profile. 113 253 IPR005175 -
Mtr5g1654 281 SUPERFAMILY AF0104/ALDC/Ptd012-like 115 232 - -
Mtr5g1654 281 PANTHER DUF296 DOMAIN PROTEIN 1 262 - -
Mtr5g1654 281 MobiDBLite consensus disorder prediction 45 105 - -
Mtr5g1654 281 Pfam Plants and Prokaryotes Conserved (PCC) domain 118 232 IPR005175 -
Mtr5g1654 281 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 1 262 IPR039605 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1654 Mtr-Chr5 18125500 18129829 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g1654 36 239 AT-hook Motif Nuclear Localized (AHL) Family AT2G33620 40.094 5.47e-29 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1654 - - mtr:MTR_5g041430 531.561