Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1622 ATGTCTGGTGCTCCGAATTTGAAGAAACTGCATCTTGATTCATGTAAAAGTTTGGTTGAAGTTCATGATTCCATTGGATTCCTTGAAAAACTTGAAGATTTGAATCTTAATTATTGCACCAGTCTCACGATTCTTCCTTACGGCATCAACTTACCTTCTCTTAAAACCATGTCCCTTCGGAATTGTACAACTGTCAAGAATTTTCCAGAAATTTTAGGGAAGATGGAAAACATAAAATACCTTGTTTTAAGTAATAGCGAGATAAGTGAATTACCCTACTCCATTGGACTTCTTGTGGGTCTTGTAAACCTTACTATAGACAGATGCAACAAGCTACTTGAACTACCGAGTAGTATTTTTATGTTGCCAAAACTTGAGACCTTAGAGGCTTACTGTTGCAGGGGGCTTGCGCGAATTAAGAAGAGAAAAGGTCAAGTGCCGGAAACACTGCCTTCAGATGTGAGAAATGCTAGTTCTTGTTTGGTTCATAGAGATGTTGACTTGAGCTTTTGCTATTTGCCATATGAATTTCTTGCCACACTTCTTCCTTTCTTACACTATGTCACAAATATATCTCTTGATTACAGCAGCATTACAATCCTTCCTTCAAGCATCAACGCGTGTTATTCTTTGATGAAACTTACGATGAATAATTGTACGGAGCTTCGAGAAATCAGAGGCCTGCCACCAAACATAAAACATCTTGGTGCAATAAATTGTGAATCACTGACTTCCCAATCCAAGGAAATGCTACTAAATCAGATGCTGCTCAATTCCGGAATCAAATACATCATTTATCCTGGATCAAGTATCCCAAGTTGGTTCCATCAACGTACATGTGAACAATCCCAGTCCTTCTGGTTCCGTAACAAATTGCCAGAAATGGCGCTATGTCTTGTTGGAGTTTTAGGTAGTTGTGACTTTACGGCACGTAGTGATGAGTATATTTTCGACCTGATCATTGATAGAAATCAACAAAGCAATCACATTTTCTATGTTAGATGGTCTGAAAATAATTTATTTGATACAAATCATATACTTCTGCTAGACGTGCAGCTCAAACCTAGCCTTGATATGATTGGAAGAGTACAATCTGAGAATGGATGGAATCATGCTGAACTTCTGTTGATGAAAAATGGCGGAGAATATATGAAATGGAGGAGAGTTTATGTACGAGAACAGATGATGAACATGCCAGACATTCTATTTATAAATCCTGAGGTTTCAATTGGAAAAGAAAATAAAGAAGTAACCTGTGGGGATAAGAGATCACAAAAGAATTTACAAGATCTAACTAGTAGTACTCTTTGCATAAAAAAAATAAAAAAATCAAACTAG 1338 0.37 MSGAPNLKKLHLDSCKSLVEVHDSIGFLEKLEDLNLNYCTSLTILPYGINLPSLKTMSLRNCTTVKNFPEILGKMENIKYLVLSNSEISELPYSIGLLVGLVNLTIDRCNKLLELPSSIFMLPKLETLEAYCCRGLARIKKRKGQVPETLPSDVRNASSCLVHRDVDLSFCYLPYEFLATLLPFLHYVTNISLDYSSITILPSSINACYSLMKLTMNNCTELREIRGLPPNIKHLGAINCESLTSQSKEMLLNQMLLNSGIKYIIYPGSSIPSWFHQRTCEQSQSFWFRNKLPEMALCLVGVLGSCDFTARSDEYIFDLIIDRNQQSNHIFYVRWSENNLFDTNHILLLDVQLKPSLDMIGRVQSENGWNHAELLLMKNGGEYMKWRRVYVREQMMNMPDILFINPEVSIGKENKEVTCGDKRSQKNLQDLTSSTLCIKKIKKSN* 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1622 445 Gene3D Ribonuclease Inhibitor 1 67 IPR032675 -
Mtr5g1622 445 Gene3D Ribonuclease Inhibitor 68 257 IPR032675 -
Mtr5g1622 445 PANTHER NB-ARC DOMAIN PROTEIN 2 422 - -
Mtr5g1622 445 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 2 422 IPR044974 GO:0006952
Mtr5g1622 445 SUPERFAMILY L domain-like 5 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1622 Mtr-Chr5 17727808 17729442 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g1622 1 139 WRKY Transcription Factor Family AT4G12020 38.849 2.84e-14 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1622 - - mtr:MTR_5g040490 902.894