Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1618 ATGGGTGAAGAAACAAGTGAAGTTGTGTTGTTGGGAAACTGGGCTAGCTCTTACTGCACCAAAGTAGAACTAGCCCTTAAAGTGAAGGGTATACCTTACAAGTATGTGGACGAAGATTTGAGAAACAAAAGTGATTCCCTCTTAAAGTACAATCCTGTCCATAAAAAGGTCCCAATTCTCTTACACAAAGGAAGGTCAATTTGTGAGTCACAAATCATTCTTGAATACATCGATGAGATTTGGGATCATAGTCCCAAATTGTTGCCAGAGGATCCTTATCAAAGAGCTAAAGTTCGTTTTTGGGCCAACTACTTTGATCAGAAAATCATTCCTAGTAGCTACCGCATATTCCAATCACGGGGAGAAGAGAGAAAGAAAGCTGCAGAAGAGATGGAAGAGATACTTGTGGTGTTTGAAGAAGGGGTCAAGGAAGGTTTTAATGAGAAATTCCACTTCTTCAACGGCGAAACACTAGGACTCCTCGACATTGTGGTAGCTGCGACTTCTTGCACCTACGAAGCATTTCAGGAGGCCTGTGAGATAGAGGTCTTCACACCCGAAAAGATGCCGAAATTTTTCATTTGGGTGAATAACTTGAAGGAACATCCCCTGGTGAAGGAGACACTTCCTCCTCATGAGAAGTTGGTTGCCAAACTGAAAAGCATTATTGGAACATGA 678 0.4204 MGEETSEVVLLGNWASSYCTKVELALKVKGIPYKYVDEDLRNKSDSLLKYNPVHKKVPILLHKGRSICESQIILEYIDEIWDHSPKLLPEDPYQRAKVRFWANYFDQKIIPSSYRIFQSRGEERKKAAEEMEEILVVFEEGVKEGFNEKFHFFNGETLGLLDIVVAATSCTYEAFQEACEIEVFTPEKMPKFFIWVNNLKEHPLVKETLPPHEKLVAKLKSIIGT* 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1618 225 CDD GST_N_Tau 8 81 - -
Mtr5g1618 225 Pfam Glutathione S-transferase, N-terminal domain 15 80 IPR004045 -
Mtr5g1618 225 Gene3D Glutaredoxin 4 87 - -
Mtr5g1618 225 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 91 219 IPR010987 -
Mtr5g1618 225 SUPERFAMILY GST C-terminal domain-like 79 222 IPR036282 -
Mtr5g1618 225 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 4 222 IPR045073 -
Mtr5g1618 225 CDD GST_C_Tau 92 220 IPR045074 GO:0004364|GO:0006749
Mtr5g1618 225 SFLD Main (cytGST) 5 221 - -
Mtr5g1618 225 Gene3D - 88 224 - -
Mtr5g1618 225 PANTHER GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN 4 222 - -
Mtr5g1618 225 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 6 85 IPR004045 -
Mtr5g1618 225 SFLD Main.3: Omega- and Tau-like 5 221 IPR045073 -
Mtr5g1618 225 SUPERFAMILY Thioredoxin-like 8 109 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1618 Mtr-Chr5 17706517 17707987 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g1618 1 217 Glutathione S-transferase Gene Family AT1G74590 42.396 4.34e-66 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1618 K00799 - vvi:100263691 278.485
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g1618 5 17706517 17707987 Mtr5g1618 5 17706517 17707987 ECH