Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1608 ATGGCTTCCAAGACCCCAATACGATCCACCACTACACCCCTCTCCAACTCAATCTTCAAATCTAAACACATTTTCTTACATGAATGGTGGCTTGTGAAACCTCCAAACCAATGCAAGGGTTTAGCGCTTGCTGGCATTGCTTCAATGGAGAGAGAAAGAATGTTTTTTTCTTCAGTGATTGTAGAGAGACATGAACCCAATGTTGTAGAGACTCAAGATGGCATCACTGTAATGTTTCACGGTTTGATCAACGCTTCACGTACATCTCAAAATGGTTTTTCTTCTGAGGTATGTCGCCGTTTCTCGGTTGGATTTCCACACAATTGGAAAAATTATTCAGCTCATAGTTCAGAAAATGAATGTGAAAACGTGGATAAAGTTACTGGTTTTGACGACTCAAATACTTCTTCCCACAAAAAAACAGCTGATGAGACCTCACAGGAAGCTGAAGGTAACAACAATATTGCGAATCTTAGGTTGTCTCAACCACATGTTGGTGTGATTTATAATGGTGAAAATGGATTCTCAAATGCTTCACCCCACAAAAAAGCAGCTGATGGAACTTTGCAGGAAGATATAGAACCTGAAGGTAATGACAACATTGCGGGTCTTAAGTTGTCTCAGCAGGAAGATATGGAACCGGAAGGCAATAACAACATTGCGAGTCTTGATTTGTCTCAACCGCAGGTTGACATGATTTCTAATGGTGAAAATGGAGTCTCAAGTGTTGCTGCAGCTGAAAATAGTCAATATTTTATGAGTGTATTTGAATTTGATCCTACCCATGAGCCTGATAGTCTTAGGTCTCCACTTTACGCAAAGAAATTGGATTTTGACATATTATCAAGTGACCGCATGGATAAGAAACGTACCAAGAAGAAGATTGTAAAGGAAACTGGTAAATTGTGTAGTAGTAGGGTGCTGACAAGAAGCATTGCCAAGAAAAGTCACATGATGCTTAAAAAGGATGGGAAAACTGCAGTAAAATGTTTCACTTCTCCTGTTAGAAGATCTACCAGGCTACTAAATTATCAAAAATGA 1041 0.3939 MASKTPIRSTTTPLSNSIFKSKHIFLHEWWLVKPPNQCKGLALAGIASMERERMFFSSVIVERHEPNVVETQDGITVMFHGLINASRTSQNGFSSEVCRRFSVGFPHNWKNYSAHSSENECENVDKVTGFDDSNTSSHKKTADETSQEAEGNNNIANLRLSQPHVGVIYNGENGFSNASPHKKAADGTLQEDIEPEGNDNIAGLKLSQQEDMEPEGNNNIASLDLSQPQVDMISNGENGVSSVAAAENSQYFMSVFEFDPTHEPDSLRSPLYAKKLDFDILSSDRMDKKRTKKKIVKETGKLCSSRVLTRSIAKKSHMMLKKDGKTAVKCFTSPVRRSTRLLNYQK* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1608 346 MobiDBLite consensus disorder prediction 125 150 - -
Mtr5g1608 346 PANTHER TRANSCRIPTION REGULATOR OTHERS FAMILY-RELATED 9 209 - -
Mtr5g1608 346 PANTHER TRANSCRIPTION REGULATOR OTHERS FAMILY-RELATED 209 346 - -
Mtr5g1608 346 Pfam SANTA (SANT Associated) 24 112 IPR015216 -
Mtr5g1608 346 PANTHER MIS18-BINDING PROTEIN 1 209 346 IPR039110 -
Mtr5g1608 346 PANTHER MIS18-BINDING PROTEIN 1 9 209 IPR039110 -
Mtr5g1608 346 MobiDBLite consensus disorder prediction 125 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1608 Mtr-Chr5 17559832 17563237 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mtr5g1608 SANTA 1.5e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1608 - - mtr:MTR_5g040080 677.937