Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1595 ATGGCAGAAGCCTTACTTGGAGTTGTGTTTGAGAATTTGTTATCTCTGGTTCAAAATGAAATTGCAACCACTTTTGGAATTAAGTCAAAGGTCGAAAAGCTATCAACCACCTTGGATCTGATCAAGGCTGTTCTTGAAGATGCTGAGCATAAACAAGTCACAGATCGCTCTAACAAGGTATGGCTTCAACAACTCAAAGATGTTGTTTATGTGCTAGATGATATTCTTGATGAGTGCTCAATCGAGTCTGGTCGGCTTAGAGGCTCATCCTATTTCAAACCAAAGAACATCATATTTCGCCGTGAGATCGGCCAAAGGTTGGAAGAGATTACAAGGAGATTTGATGAATGGCGCCAAACCAGCTCCTTTATTGCTGAACCAAAGGTGTTTGGACGGGAAGATGATACAAAGAAGATTGTTGAGTTTCTGCTCACCCAAGCAAGGGATTGTGAAATCCTTTCAGTCTATCCCATAGTTGGGTTAGGTGGTATTGGTAAAACAACTCTAGCTCAATTGGTCTACAATGATGTTAGGGTGAGTAGCAATTTTAATACAAAAATTTGGATTTGTGTTTCTGATGCTTTCTCAATCAAGAGGATTTTGTGTTCCATCATAGAATCTATAATAGGTGGAAAGTGTGATGCCTTGGATTTAGATGTATTACTAAGAAAGGTGAAAGAACTATTGAAAGGTAAAAGATATTTTCTGGTTTTGGACGATGTGTGGAACAAAATGCAACAATTAGCATTCGGATTAAGCCAAGAGAAATGGAATACGTTGAAATCAGTGTTTATGTGTGGATCCAAAGGTAGTTCCATTTTAGTGTCCACTCGTGATGAGGTTGTTGCGGCAATCATGGGAACATGTCAAGCTTATCCTTTATATGGTCTCTCTGATAATGAATGTTGGTTGTTGTTCAAACAATATGCATTTGGAAATGACAAAGAAGAGCGCGAGGAACTTGTCCCAATAGGCAAGGATATAGTAAAGAATGTATGTATTTAG 1005 0.3861 MAEALLGVVFENLLSLVQNEIATTFGIKSKVEKLSTTLDLIKAVLEDAEHKQVTDRSNKVWLQQLKDVVYVLDDILDECSIESGRLRGSSYFKPKNIIFRREIGQRLEEITRRFDEWRQTSSFIAEPKVFGREDDTKKIVEFLLTQARDCEILSVYPIVGLGGIGKTTLAQLVYNDVRVSSNFNTKIWICVSDAFSIKRILCSIIESIIGGKCDALDLDVLLRKVKELLKGKRYFLVLDDVWNKMQQLAFGLSQEKWNTLKSVFMCGSKGSSILVSTRDEVVAAIMGTCQAYPLYGLSDNECWLLFKQYAFGNDKEEREELVPIGKDIVKNVCI* 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1595 334 Gene3D - 6 115 - -
Mtr5g1595 334 Coils Coil 31 51 - -
Mtr5g1595 334 CDD RX-CC_like 2 113 IPR038005 -
Mtr5g1595 334 Pfam NB-ARC domain 133 331 IPR002182 GO:0043531
Mtr5g1595 334 Gene3D - 116 291 IPR027417 -
Mtr5g1595 334 PANTHER DISEASE RESISTANCE PROTEIN RP 25 331 IPR044974 GO:0006952
Mtr5g1595 334 PRINTS Disease resistance protein signature 155 170 - -
Mtr5g1595 334 PRINTS Disease resistance protein signature 228 242 - -
Mtr5g1595 334 PANTHER OS08G0543100 PROTEIN 25 331 - -
Mtr5g1595 334 Pfam Rx N-terminal domain 6 98 IPR041118 -
Mtr5g1595 334 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 112 331 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1595 Mtr-Chr5 17328984 17330321 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g1595 158 318 WRKY Transcription Factor Family AT5G45050 28.395 9.94e-07 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1595 - - mtr:MTR_5g039570 655.21