Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1571 ATGGGGAAAGGGAGAAGTCCTGGGAAATGGATCAGGAGTTTACTCTCAGGAGGGAAGAAATCGTCATCGAAGTCTAGTTCGTCAAAGAAGAATGATATTTTTAAATCTTCGAGTAACAAGGATGCACTGGGATCTTCTGAGTTAACTGTGTCTAATCCAATTTCAACTGTGGATTCTTTGCAAATATCCGCACCAATATCTGGAGCAAATGTTGCGAAAGCAGTTATTTCAGAAAAGGAAGTAGTCAATAAGTCTTCACATGAGAGGGGTATTCTCTCAAATGGAGATGAAAAGGCTCAAGCACCGGCCTTTGCTAATGTTGCATCTCAAGATGATCTTGAGACACTCAGGCTTACGGAAGCAGCTATTAAACTTCAGTCCGCTTGCAGAGGCTATCAGGCTCGTCGGGAATTTCAAACTCTCAAAGCTATTACACAGCTGCAAGCTTTTATCCGTGGTCACTTGGTTAGAAGACAAGCTGTTTCTGCTTTATATTGTGTGAAGGGAATTGTTACAGTGCAAGCATTGGCTCGTGGTTACAATGTTAGACGTTCTGATATTGGGCTTGAGGTCTTGAAAATTCGCAAGGATACTCAATGTTCAAAATCTATTGGCGTTGTTACATCTACACCGGCAGACAAGCTGTCAGAAAATGCCTTTGTTTGCCAGCTGCTGGCTTCATCGACCCATGCGTTTCCTCTATCTCTAAATAGTGATCTTGGAGAACCTTACTTGGCTTCGAAGTGGCTTGACCGTTGGACAACATCAAGCTTTTGGGCACCTCTTCCTAAATTGAAGAAGAAACTTGACTCGGTGTCGGCTGAAAAGGTACAAGTTAAAAGGACTACCCGGAAATCACCTGCTGTGAAAGCTGATGAGGGCTCAAGTTCTGGTTCTAACAAACAAAAACAACGTCCAAAAAAGGATTCAAACCACTCATTGGTTTCAGCTCAGGCACAAGAACACCCAAAGAAAGAAATTGAGAAAAGTAGTCTAAAGAAAACTCGTGTGCAGAATGTTTCAGACAGATCTGAGATTGTTAACGAGAAAAGAAAACACAGCTCTAGGGCAACTTCAGATCAAACTGTTACTGATGTTTCAGAGCAGGGGTCAGGTTCCTCTTCTGAGAAAATAAAAGAAACGACGGTGCCTAAGTCAGAGAAAGTACTAGAAGAGAATAATGATCAGCCAAAGAAGAACTCAAATGGTGGTGCCAAAGAAGAGAAAGTTCTTGGAAAGAAAACACTAGAAGAGAAAAACGATAAGCCAAAGAAGAGCTTAAATGGCAGTGCCAAAGACGAGAAAAGTCTTGAGCAGAAAACACTAGAAGAGAATAATGATAAGCCAAAGAAGAGCTTAAATGGCAGTGCCAAAGAAGAGAAAAGTCTTGGACAGAAAACACCAGAAGAGAACAATGATAAGCCAAAGAAGAGCTTAAATGGCGGTGTCAAAGAAGAGAAAGATCTTGGACAGAAAACACAAGAAGAGAATAATGATAAGCCAAAGAAGAGCTTAAATGGCGGTGTCAAAGAAGAGAAAGATCTTGGACAAAAAACACAAGAGAATAATGATAAGCCAAAGAAGAGCTTAAGTGGCGGTGCCAAAGAAGAGAAAGGTCTTGGACAGAAAGCGCAAGAAGAGAATAATGGTAAGCCAAAGAAGAGCTTAAACGGCAGTGCCAAAGAAGAGAAAGGTCTCAGACAGAAAGCACTAGAACAGGAAGGTCATAATGATCCTAACGCTGTCTTACAGACTAGTATGAAGAAGGTAGGAGATGAAGAAATAGGAGTTAGCGAAGACTTGAATGGTGGTGACAAAATTATCAGCAACAATTACCAAAGAAGAGCTTCACTGCCTGCTAATTTTAATGATCAAGAAAATGAGATACACAACACTCCAAGTCCAAGAGTGCCGAGTTATATGGCTCCAACTGAATCAGCAAAAGCTAGACTAAGGGGACAAGGCTCCCCAAGATTTGCTACTGATATCATAGACAAAAACAGTTTTACCAGGAGGCATTCACTTTCATCTTCACTTAACAGCAAGTCAGGTTCATTTTCCCCAAGAGTAGAAAAGCTGATAACTTTGAGCGGAAGAGGAGTTGCGAGGACTGATAAATCTTTGTCATCTTCAAGGGACGGGACTGATAAGATGACTCAACCTCAGTGGAGAAGGTGA 2178 0.4141 MGKGRSPGKWIRSLLSGGKKSSSKSSSSKKNDIFKSSSNKDALGSSELTVSNPISTVDSLQISAPISGANVAKAVISEKEVVNKSSHERGILSNGDEKAQAPAFANVASQDDLETLRLTEAAIKLQSACRGYQARREFQTLKAITQLQAFIRGHLVRRQAVSALYCVKGIVTVQALARGYNVRRSDIGLEVLKIRKDTQCSKSIGVVTSTPADKLSENAFVCQLLASSTHAFPLSLNSDLGEPYLASKWLDRWTTSSFWAPLPKLKKKLDSVSAEKVQVKRTTRKSPAVKADEGSSSGSNKQKQRPKKDSNHSLVSAQAQEHPKKEIEKSSLKKTRVQNVSDRSEIVNEKRKHSSRATSDQTVTDVSEQGSGSSSEKIKETTVPKSEKVLEENNDQPKKNSNGGAKEEKVLGKKTLEEKNDKPKKSLNGSAKDEKSLEQKTLEENNDKPKKSLNGSAKEEKSLGQKTPEENNDKPKKSLNGGVKEEKDLGQKTQEENNDKPKKSLNGGVKEEKDLGQKTQENNDKPKKSLSGGAKEEKGLGQKAQEENNGKPKKSLNGSAKEEKGLRQKALEQEGHNDPNAVLQTSMKKVGDEEIGVSEDLNGGDKIISNNYQRRASLPANFNDQENEIHNTPSPRVPSYMAPTESAKARLRGQGSPRFATDIIDKNSFTRRHSLSSSLNSKSGSFSPRVEKLITLSGRGVARTDKSLSSSRDGTDKMTQPQWRR* 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1571 725 MobiDBLite consensus disorder prediction 670 690 - -
Mtr5g1571 725 MobiDBLite consensus disorder prediction 270 725 - -
Mtr5g1571 725 MobiDBLite consensus disorder prediction 702 725 - -
Mtr5g1571 725 ProSiteProfiles IQ motif profile. 118 146 IPR000048 GO:0005515
Mtr5g1571 725 PANTHER IQ-DOMAIN 5-RELATED 1 434 - -
Mtr5g1571 725 PANTHER IQ-DOMAIN 5-RELATED 419 722 - -
Mtr5g1571 725 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 419 722 - -
Mtr5g1571 725 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 434 - -
Mtr5g1571 725 MobiDBLite consensus disorder prediction 319 358 - -
Mtr5g1571 725 Pfam IQ calmodulin-binding motif 119 139 IPR000048 GO:0005515
Mtr5g1571 725 Pfam IQ calmodulin-binding motif 142 159 IPR000048 GO:0005515
Mtr5g1571 725 Gene3D - 115 166 - -
Mtr5g1571 725 MobiDBLite consensus disorder prediction 1 46 - -
Mtr5g1571 725 MobiDBLite consensus disorder prediction 270 288 - -
Mtr5g1571 725 MobiDBLite consensus disorder prediction 604 639 - -
Mtr5g1571 725 MobiDBLite consensus disorder prediction 359 379 - -
Mtr5g1571 725 MobiDBLite consensus disorder prediction 380 574 - -
Mtr5g1571 725 ProSiteProfiles IQ motif profile. 142 169 IPR000048 GO:0005515
Mtr5g1571 725 MobiDBLite consensus disorder prediction 16 46 - -
Mtr5g1571 725 Pfam Protein of unknown function (DUF4005) 624 696 IPR025064 -
Mtr5g1571 725 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 116 184 IPR027417 -
Mtr5g1571 725 SMART iq_5 140 161 IPR000048 GO:0005515
Mtr5g1571 725 SMART iq_5 117 139 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1571 Mtr-Chr5 16884218 16890089 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g1571 613 725 IQD Protein Family AT1G14380 47.414 4.19e-21 95.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1571 - - mtr:MTR_5g038620 1369.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g1571 5 16884218 16890089 Mtr5g1571 5 16884218 16890089 ECH
Mtr5g1571 5 16884218 16890089 Mtr4g3907 4 52809364 52816664 ECH
Mtr5g1571 5 16884218 16890089 Mtr4g3907 4 52809364 52816664 PCT