Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1570 ATGAAGAATTTCTTTGTTTCTTTATACTTTTTGTTTCCTACAATCTTTACAATTATTCTTGTGCTACTTACTCCAATTCCAAGTGCACAATTAACAAATAGTGAAACTAGAATTCTTCTTCAACTTCAAACACTTCTTGAATATCCTCAAGAATATCCACAACTTCTTCAAAACAATCTCACAAATTTCTGTAACATCTCTTCATCACCTTCTTTCAACATTGTCTGCACAAAGAATCATGTAACAGAATTAACAATCATTGGAAACAAAACAAGACCAGTTTCTTGGAAGTCAAGGAAAACTCTTTCTGAAAGATTTTCTATTGATTCTTTTTTTACTGTTGTGACAAAGCTTTCAAAGATGAAGGTTTTGTCATTGGTTTCACTTGGTTTGTGGGGTCCACTACCTTCCAAGATTAGTAGGTTTAAGTCACTTGAAGTTTTCAACATTTCATCAAATTTCTTGTATGGAAAAATTCCATCATCAGTTTCTTCAATGAAAAGTCTTAAGAGTCTTGTTTTGGCTGATAATTTTTTCAATGGAAGTGTTCCTAATCTCAAAAGATTAACCTCTCTTGAAGAGATTAATCTTGCTAACAACAAATTAGGACCTGGATTTCCTTCATTTCTGTTCTCTCTTCCTTTGATTCAGAAGCTAAACTTGGCTTCAAATCAATTTAATGGTTCATTTTCTATGAATATATCTTGTGGTTCTTCTCTAACATTTGTTGATATCTCAAACAATTCTCTAGAAGGAAAATTGCCATCATGCATTGATTCGACATTGTCGTTGAATCGAACAATAGTTTATTCTGGTAATTGTTTATCAGCAAGAAATGTCAGTGATCAACATTCATCTTCACATTGCAAGAATTCAACGGTGTTAGCCGCTAAGCCGAGATTTGAGAAGCCGAAAAAATCAATGATGCAGCTAGGAGTATTATTTGGTATTATTGGAGGTTTTGTTGGAATTGTAGGGCTTTTGATTCTACTCTTTCTGTTCATTTTGAGAAAGTCCAAAGCAGAAAGAGAAGATAGATCTGTTGATATTTCAAGAGAATCAAGACTAAATATTTATGCAAGGAGTAATGTTCCCCAGCTAATGAGGCTAACTACACTTGGATTACCACCATACAACATTTTCACAATAGAAGAAATTGGAGATGCAACCAACAACTTTGATCCATCAAATCTAATAGGAGAAGGATCACAAGGAGAGCTATTTAAAGGTTGGCTCAAAGATGGTTCAATGGTCATGGTTAATCTTGTAAAAGTAAAGCAGAAGAGTTTGATCAAAGTCAGTGATCAGAATTTGAAGGTGTTACCTTATTTAAGGCATAGACATTTGGTGAGTGTTTTAGGACACTGTGCTATTACTTATGAGGACCAACCCAAAATGACAAGCACAATATTCATTGTATTTGAGCATATCTCAAACATGTCATTGAGGATTCATCTTACAGATAAGAGACAAAGGGAAATGCTGAAGTGGCAACAAAGAATGGCAATCATCATAGGCATTGCTAGAGGAATTCAATTCTTACATACAGGAGTTAATCCTGGCATATATGGAAACAACATAAAGATTGAGAACATTTTGTTGGACAATAATCTCAATCCAAAAGTTAGTGGATATAGCATTCCATTAATTCCATCCAAGAAAGGTTCTGACAGAAAACTTAAAGAACAAAATGCACACAATCATATTGGCAGCATCAATAGTGCAGAAAAGGAAGACATATATCAATTTGGTGTAATTCTACTTGAAGTTATCACTGGCAAACTAATTACATCTTCTATTGAAGTAGAGGTGCTGAAGTATGAGCTTGAGAGAGGTTTATCTGAAGTTGCATCACCGATCGCGTTAAAGAGCGCAATTGATCCTTCCCTCCATGGAACTTATACACATGAATCATTGAAGACTGCAGTTCAGCTCACCATCAATTGTCTCAACAAGGTTCCCGGTAATCGTCCTTCAATCGAAGATGTTATCTGGAATCTGCAGTATTCCGTGCAAGTTCAAGAGGCAAGGTCTAGCAAAACCTCAACATGA 2052 0.3499 MKNFFVSLYFLFPTIFTIILVLLTPIPSAQLTNSETRILLQLQTLLEYPQEYPQLLQNNLTNFCNISSSPSFNIVCTKNHVTELTIIGNKTRPVSWKSRKTLSERFSIDSFFTVVTKLSKMKVLSLVSLGLWGPLPSKISRFKSLEVFNISSNFLYGKIPSSVSSMKSLKSLVLADNFFNGSVPNLKRLTSLEEINLANNKLGPGFPSFLFSLPLIQKLNLASNQFNGSFSMNISCGSSLTFVDISNNSLEGKLPSCIDSTLSLNRTIVYSGNCLSARNVSDQHSSSHCKNSTVLAAKPRFEKPKKSMMQLGVLFGIIGGFVGIVGLLILLFLFILRKSKAEREDRSVDISRESRLNIYARSNVPQLMRLTTLGLPPYNIFTIEEIGDATNNFDPSNLIGEGSQGELFKGWLKDGSMVMVNLVKVKQKSLIKVSDQNLKVLPYLRHRHLVSVLGHCAITYEDQPKMTSTIFIVFEHISNMSLRIHLTDKRQREMLKWQQRMAIIIGIARGIQFLHTGVNPGIYGNNIKIENILLDNNLNPKVSGYSIPLIPSKKGSDRKLKEQNAHNHIGSINSAEKEDIYQFGVILLEVITGKLITSSIEVEVLKYELERGLSEVASPIALKSAIDPSLHGTYTHESLKTAVQLTINCLNKVPGNRPSIEDVIWNLQYSVQVQEARSSKTST* 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1570 683 SUPERFAMILY Protein kinase-like (PK-like) 374 667 IPR011009 -
Mtr5g1570 683 Gene3D Phosphorylase Kinase; domain 1 358 465 - -
Mtr5g1570 683 Gene3D Transferase(Phosphotransferase) domain 1 477 682 - -
Mtr5g1570 683 Gene3D Ribonuclease Inhibitor 32 297 IPR032675 -
Mtr5g1570 683 Pfam Protein kinase domain 396 663 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g1570 683 ProSiteProfiles Protein kinase domain profile. 393 669 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g1570 683 PANTHER RECEPTOR-LIKE KINASE FAMILY PROTEIN, PUTATIVE-RELATED 3 208 - -
Mtr5g1570 683 PANTHER RECEPTOR-LIKE KINASE FAMILY PROTEIN, PUTATIVE-RELATED 209 680 - -
Mtr5g1570 683 PANTHER OS07G0166700 PROTEIN 209 680 IPR045272 GO:0004714|GO:0006468
Mtr5g1570 683 PANTHER OS07G0166700 PROTEIN 3 208 IPR045272 GO:0004714|GO:0006468
Mtr5g1570 683 SUPERFAMILY L domain-like 32 264 - -
Mtr5g1570 683 Pfam Leucine Rich Repeat 239 259 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1570 Mtr-Chr5 16872792 16876058 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g1570 52 676 Miscellaneous Gene Families AT3G03770 37.022 1.29e-149 452
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Mtr5g1570 Pkinase 1.8e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1570 - - mtr:MTR_5g038600 1258.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g1570 5 16872792 16876058 Mtr5g1570 5 16872792 16876058 ECH