Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1545 ATGGCTTTTCAATCGTTCCCCTCTTCCTTTTCCTCTTCCTCATCCTTCTCCTACGGATTCAACTATGATGTTTTCCTAAATTTTTGTGGCGATGACACTCGCTTTCATTTTACTGGTAATCTGTACAAAGCTCTATGTGACAAGGGAATCCGTGTCTTCATTGATGACAAGGAACTTCAGAGAGGTGACAAAATCACACCATCACTTATCAAGGCAATTGAAGACTCAAGGATTGCAATCCCCGTGTTTTCTAAGAACTATGCATTTTCCTCGTTTTGTTTGGATGAACTTGTCAACATCATTGATGGCTTCAGTGCAAAAGGTCGGCTAGTTTTGCCTGTTTTCTATGACGTGGATCCTTCGCATGTGAGACATCAGATTGGAAGTTATGGTGAAGCTATAGCCATGCATGAAGCAAGGCTTAAACGCGACAAAGAAATGTACATAGATAATATGGATAGGCTGCAGAAATGGAAGACGGCTCTTAATCAAGCTGCTAACCTCTCCGGTTATCATTTCAATCACGGGAATGAATATGAACACGAGTTTATTGGAAGGATAATGAAAGAGGTAGCCAAGAAGATCAACCGTGATCTATTACACGTTGCAGATTATGCCGTTGGATTGGAGTCTCGTTTGCTACAAGTAAATTCACTACTATCTGTTGAATCTAATAATGGGGTATATATGGTTGGGATCCATGGAATTGGAGGAATCGGTAAAACAACACTTGCTCGAGCAATTTATAATTTGATTGCTGATCAATTTGAATGTTTGTGTTTTCTTCATGACGTGAGAGAAAATTCATCTAAACATGGCTTAGAACATCTTCAAGAAAGGCTCCTTTCCAAAACCATTGGATTAGACATTAAGTTAGGACATGTTAGTGAAGGAATTCCAATAATAAAACAAAGGCTACAACAAAAAAAGGTTCTTTTGATTCTCGATGATGTTGATGAGCAAAAGCAATTGCAAGTTATGGTTGGAGAGCCCGATTGGTTTGGTCCTGGAAGTAGAGTCATCATTACCACTCGAGACAAACACTTACTAACAAGTCATGGTATTGATAGAATATATGAAGTGGATGGTTTAAATGGAGAAGAAGCTCTAGAACTATTGAGGTGGAAGACTTTTAAAAATAACAAAGTCGATTCAAGTTTCGAGTACATTTTAAAATATGTTGTAACTTATGCTTCTGGCCTTCCATTAGCTTTAGAAGTAGTAGGATCTAACTTGTTTGGAAAGAATATAGAAGAATGGAAATCTACATTTGATCGATATGAATGGATTCCTGGTAAACGAATTCACAAAATACTTAAAGTAAGTTTTGATAGTTTGGAGGAAGATGAAAAGAGTGTTTTTTTGGACATTGCTTGTTGCTTCAAAGGATATGATTTGACGGAAGTTGAGTTTATACTTTGTGCTCATTATGGTAAATGCATAAAATACCATATTGGAGTATTGGTTGAAAAATCCCTTATAAAGATTAATCAATGGGGTTATGTGACATTGCATCACTTGATTGAGGACATGGGTAAAGAAATTGTCCGAAAAGAATCCCCAAAACATCCTGGTAAACGCAGTAGGTTGTGGTTTCACGAAGATATAGTTCAAGTTTTAGAAGAAAATATGGGAACAACAGAGATTGAAATTGTATATCTAGATTTCCCATTATTTGAAGAAGTGGTTGAATGGAAAGGTGATGAGTTCAAGAAGATGATAAACCTCAAAACACTTATTATTAAGAATGGTCACTTTTCCAAAGGACCAAAACATCTTCCAAATAGTTTAAGAGTGCTTGAATGGCATAGATATCCTTCACTGAGTATACCTTCCAACTTTTATCAAAAGAAACTTTCCATATGCAAGTTAGGTGAAAGTTTCTTTACCACATTTGAGTTGCATGGATCATTGAAGGTATGTGTAAATGAGTTCATTTCTCTCGTCTTGTATACCAAAACCATTTTAACATTTATCATTGTTCTCATTTTGCAGAAGTTCGTGAATATGAGAGAGTTAAATTTAGACAATTGTAAATATTTGACGCATATATTTGACGTATCTTGTCTCCCAAATTTAGAAAAAATTTCATTTCGGCATTGTGAGAATTTAATGACGATTGATAGTTCTGTTGGATTTCTAAATAAACTTAAAATCATAAGAGCTGATGGTTGCTTAAAACTCATGAGTTTTCCACCAATGGAATTGACTTCTCTTCAACGGTTAGAACTTTCATTTTGTGATAGTCTCGAATGTTTTCCTGAAATTTTAGGAGAGATGGAAAATATAACAGAGATAGTCTTGGAGGGAACTTCCATAGAAGAATTGTCATACTCATTTCAAAATCTCACGGGGCTTCGGAAATTACAAATACGCAGGAGTGGAGTACTTAGATTACCAAGTAACATTCTCATGATGCCAAAATTGTCATATATACTTGTGGAGGGTATTCTATTATTGCCAAACAAGAATGATAATTTGAGTTCCTCGACGTCTTCAAACGTTGAAATTCTTCGACTCCCAAATTGCAACTTGTCAGATGAATTTCTCCAAACAAGTCTCGCATGGTTTGCTAATGTCATACATTTAGACCTATCGAGGAATAGTTTCACAATACTTCCAGAATTTATCAAAGAATGCCACTTTTTGATTACGCTTAATTTGAATGACTGCACATGTCTTCGAGAAATTAGAGGGATTCCTCCAAATTTAAAACGTTTGTCTGCATTGCAATGTGAATCTTTGTCTTCCTCATGCAGAAGCATGCTACTGAATCAGGAATTGCATGAAGCTGGAAGTACAGATTTTTGTTTGCCAGGAACCTCACCGATTCCAGAGTGGTTTCAACACCAAACTAGAGGATCTTCAATTTCATTTTGGTTTCGTAACAACGTTCCTTCTGTATCTCTCTTTGTTGCTTTAAAACCAATGCGTAACGAGTGCATCAACTATGGATTTCTTCCTTTAGCAACAATCAATTTGACCATCAATGGCCATAAATTTGATCTTCGTTGTCCGCCTGATGGTATTCGTCTCATGATGTCGTTGGGTCATACATATTTATCTGATATGCAACTACACGAAATGGATCTCGAATCTAAATTGGAAGAAGAACTTTTGAGAAATGAATGGGTCCATGTAGAGGTTTTGTTTAAGCATCAAATGAAGAAAACACTCCTTATAGAAAGTGGAATTCACTTATTCAAGCAGAAAAGTAGCATGGAGGATATCCAATTTAATAATCCTTAG 3249 0.3604 MAFQSFPSSFSSSSSFSYGFNYDVFLNFCGDDTRFHFTGNLYKALCDKGIRVFIDDKELQRGDKITPSLIKAIEDSRIAIPVFSKNYAFSSFCLDELVNIIDGFSAKGRLVLPVFYDVDPSHVRHQIGSYGEAIAMHEARLKRDKEMYIDNMDRLQKWKTALNQAANLSGYHFNHGNEYEHEFIGRIMKEVAKKINRDLLHVADYAVGLESRLLQVNSLLSVESNNGVYMVGIHGIGGIGKTTLARAIYNLIADQFECLCFLHDVRENSSKHGLEHLQERLLSKTIGLDIKLGHVSEGIPIIKQRLQQKKVLLILDDVDEQKQLQVMVGEPDWFGPGSRVIITTRDKHLLTSHGIDRIYEVDGLNGEEALELLRWKTFKNNKVDSSFEYILKYVVTYASGLPLALEVVGSNLFGKNIEEWKSTFDRYEWIPGKRIHKILKVSFDSLEEDEKSVFLDIACCFKGYDLTEVEFILCAHYGKCIKYHIGVLVEKSLIKINQWGYVTLHHLIEDMGKEIVRKESPKHPGKRSRLWFHEDIVQVLEENMGTTEIEIVYLDFPLFEEVVEWKGDEFKKMINLKTLIIKNGHFSKGPKHLPNSLRVLEWHRYPSLSIPSNFYQKKLSICKLGESFFTTFELHGSLKVCVNEFISLVLYTKTILTFIIVLILQKFVNMRELNLDNCKYLTHIFDVSCLPNLEKISFRHCENLMTIDSSVGFLNKLKIIRADGCLKLMSFPPMELTSLQRLELSFCDSLECFPEILGEMENITEIVLEGTSIEELSYSFQNLTGLRKLQIRRSGVLRLPSNILMMPKLSYILVEGILLLPNKNDNLSSSTSSNVEILRLPNCNLSDEFLQTSLAWFANVIHLDLSRNSFTILPEFIKECHFLITLNLNDCTCLREIRGIPPNLKRLSALQCESLSSSCRSMLLNQELHEAGSTDFCLPGTSPIPEWFQHQTRGSSISFWFRNNVPSVSLFVALKPMRNECINYGFLPLATINLTINGHKFDLRCPPDGIRLMMSLGHTYLSDMQLHEMDLESKLEEELLRNEWVHVEVLFKHQMKKTLLIESGIHLFKQKSSMEDIQFNNP* 1083
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1545 1082 ProSiteProfiles TIR domain profile. 20 195 IPR000157 GO:0007165
Mtr5g1545 1082 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 199 457 IPR027417 -
Mtr5g1545 1082 Gene3D Ribonuclease Inhibitor 501 748 IPR032675 -
Mtr5g1545 1082 PRINTS Disease resistance protein signature 230 245 - -
Mtr5g1545 1082 PRINTS Disease resistance protein signature 305 319 - -
Mtr5g1545 1082 PRINTS Disease resistance protein signature 398 412 - -
Mtr5g1545 1082 PRINTS Disease resistance protein signature 734 750 - -
Mtr5g1545 1082 SUPERFAMILY Toll/Interleukin receptor TIR domain 11 171 IPR035897 -
Mtr5g1545 1082 Gene3D - 17 193 IPR035897 -
Mtr5g1545 1082 SMART till_3 21 168 IPR000157 GO:0007165
Mtr5g1545 1082 Gene3D - 194 356 IPR027417 -
Mtr5g1545 1082 PANTHER ARCHAEAL ATPASE 32 1052 - -
Mtr5g1545 1082 Gene3D - 363 447 IPR042197 -
Mtr5g1545 1082 SUPERFAMILY "Winged helix" DNA-binding domain 434 541 IPR036390 -
Mtr5g1545 1082 Pfam NB-ARC domain 215 428 IPR002182 GO:0043531
Mtr5g1545 1082 SMART AAA_5 227 364 IPR003593 -
Mtr5g1545 1082 Pfam TIR domain 21 194 IPR000157 GO:0007165
Mtr5g1545 1082 Gene3D Ribonuclease Inhibitor 750 933 IPR032675 -
Mtr5g1545 1082 SUPERFAMILY L domain-like 505 916 - -
Mtr5g1545 1082 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 32 1052 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1545 Mtr-Chr5 16600245 16606286 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g1545 16 872 WRKY Transcription Factor Family AT4G12020 29.352 1.37e-78 281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1545 - - gmx:100814962 1176