Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1523 ATGTCCTTAACCACTCTTCTCCCCTTCCTCGTCCTTCTACTCTTCCCCACATCAACACACACATGTCCTACTAATAACACAACAAAAACACACCCTTCTCCATGCCCTCCATTTCAATCCACCCCACCTTTTCCTTTCTCCACCACCCCAGGTTGTGGCCACCCTTCTTTTCAACTAACATGCTCAACCCCTCACTCTTTCATAACCATCAACAACCTCACTTTCTCAATCCTCTCTTACAAACCTAACTCCACTTCAATCATCCTCTCACCTCACAACCCCATTTCACAACAAAACAACAATACCAAATGCCCAACAACATCCTCAATCCCAAACAAACCCATAAACCTTTCTAACACACCTTTTACTCTCTCAGATGAAACATGCTCACGTCTCTCTTTTCTTCAACCATGTTCCCCACCAAACCTCCCTAACTGCAGCCACTGTCCTTGGCAATGCAAACTCATCAAAAACCCATCAGAAATCTTCAAAAGCTGTAGATCCATGCATCATTCTGTTTCAGACAATGAACCTAGCTGCCAAAGTGATGTTCTTGTTTACCTCAATGAAATACTAATCCAAGGTATTGAACTTGAGTGGGATGAAGCTTTAACACAAGACACTTACTTCACAAACTGTAAAGAATGCATCAACAACAACAATGGTTTCTGTGGTTTCAATTCATCAGACACGAAAAAACAGTTTGTATGTTATCATTTCCATTCCAAATCAACTCTTTCACCACCGTGGATCCACAAAATGAAGCCTAGCAAAATCGCTGTTTTTGCTATTGTTATCGCTTTTACTTCATTGATTCTTTTCCTCTCCGTTGTTATCTCAATTCTTCGATCGAGAAAGGTGAACACAACGGTGGAAGAAGATCCGACTGCAGTGTTTCTTCACAACCACCGCAACGCGAATCTTCTTCCACCAGTTTTCACCTACGATGAACTGAATATATCTACAAACAACTTCGATCCGAAGAGGAAAATCGGTGATGGTGGATTCGGTTCGGTTTATTTAGGCAACCTCCGTGACGGAAAACTTGCTGCTGTTAAACATCTTCACCGGCATAATCACACGGCGGCGTTTTCATCAAAATCATTCTGCAACGAGATTCTCATTCTCTCTTCTATTGATCATCCAAACCTCGTTAAACTTCACGGTTACTGTAGCGATCCACGTGGTTTGATTCTTGTTTACGATTACGTTCCTAACGGAACCCTAGCGGAGCATCTTCACGGTTCGAAGAGTAAACGGAAGGGATACATGATGACGTGGCAAACGAGGCTTGAAATTGCGATACAAACGGCGTTAGCGATGGAGTATCTTCATTTTTCAGTTAAGCCACCGATAGTTCATAGAGATATAACTTCGTCAAATATTTTTATTGAGAAAGATATGAGAATTAAAGTTGGTGATTTTGGGTTGTCTAGGTTGTTAGTTTTGCAAGAATCAAATCAAACAACGTCGTCGGGTGGTTTTGTATGGACTGGCCCACAAGGTACTCCGGGTTATTTAGACCCGGATTATCATCGGTCTTTTCGGTTGACTGAAAAGAGTGACGTGTATAGTTTTGGTGTGGTTTTGCTTGAATTGATTTCCGGTCTTAAGGCGGTGGATTATTGTAGGGATAAGCGTGAGATGGCATTGGCTGATATGGTTGTTTCGAGGATTCATACGGGTCAGTTGAAAGAGGTACTTGACCCAGTTCTTGACTTGGGTAACGACAATGATGCGCTTGATGCGGTGGGTGCTGTGGCGGAATTGGCTTTTCGATGTGTTGCATCGGATAAAGACGATCGACCTGATTCAAAGGAAGTTGTCGGGGAATTGAAGCGTGTTCGATCACGGATAAGTGGTGGCATTACTCGGTCCATGTCTACGACTTAA 1893 0.4274 MSLTTLLPFLVLLLFPTSTHTCPTNNTTKTHPSPCPPFQSTPPFPFSTTPGCGHPSFQLTCSTPHSFITINNLTFSILSYKPNSTSIILSPHNPISQQNNNTKCPTTSSIPNKPINLSNTPFTLSDETCSRLSFLQPCSPPNLPNCSHCPWQCKLIKNPSEIFKSCRSMHHSVSDNEPSCQSDVLVYLNEILIQGIELEWDEALTQDTYFTNCKECINNNNGFCGFNSSDTKKQFVCYHFHSKSTLSPPWIHKMKPSKIAVFAIVIAFTSLILFLSVVISILRSRKVNTTVEEDPTAVFLHNHRNANLLPPVFTYDELNISTNNFDPKRKIGDGGFGSVYLGNLRDGKLAAVKHLHRHNHTAAFSSKSFCNEILILSSIDHPNLVKLHGYCSDPRGLILVYDYVPNGTLAEHLHGSKSKRKGYMMTWQTRLEIAIQTALAMEYLHFSVKPPIVHRDITSSNIFIEKDMRIKVGDFGLSRLLVLQESNQTTSSGGFVWTGPQGTPGYLDPDYHRSFRLTEKSDVYSFGVVLLELISGLKAVDYCRDKREMALADMVVSRIHTGQLKEVLDPVLDLGNDNDALDAVGAVAELAFRCVASDKDDRPDSKEVVGELKRVRSRISGGITRSMSTT* 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1523 630 ProSitePatterns Protein kinases ATP-binding region signature. 331 353 IPR017441 GO:0005524
Mtr5g1523 630 ProSiteProfiles Protein kinase domain profile. 325 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g1523 630 ProSitePatterns Tyrosine protein kinases specific active-site signature. 452 464 IPR008266 GO:0004672|GO:0006468
Mtr5g1523 630 Gene3D Phosphorylase Kinase; domain 1 301 403 - -
Mtr5g1523 630 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 25 622 IPR045274 GO:0007166
Mtr5g1523 630 CDD STKc_IRAK 331 614 - -
Mtr5g1523 630 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.5 25 622 - -
Mtr5g1523 630 Gene3D Transferase(Phosphotransferase) domain 1 404 624 - -
Mtr5g1523 630 SUPERFAMILY Protein kinase-like (PK-like) 307 612 IPR011009 -
Mtr5g1523 630 Pfam Protein tyrosine and serine/threonine kinase 328 611 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1523 Mtr-Chr5 16295352 16297986 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g1523 35 617 Receptor kinase-like Gene Family AT1G69910 59.500 0.0 697
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Mtr5g1523 PK_Tyr_Ser-Thr 3.1e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1523 - - cam:101489033 966.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g1523 5 16295352 16297986 Mtr5g1523 5 16295352 16297986 ECH