Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1521 ATGGCTACAAATGACTTAAAGCTTTTGGGTGGTTGGTTCAGTCCATTTGCAGTGAGGGCACAAATTGCCCTTTCCATCAAAGGTTTGGATTATGAGAACATTGTAGAAAACTTGAATTCCAAAAGTGATTTGTTTCTTCAGTCCAATCCTGTATACAAAAAAATCCCAGTTCTCATTCATGGAGATAAAGCCATTTGTGAATCAGCAATAATAGTTGAATATATTGATGAAGTTTGGAAAAATAATGGCACTCCCTCAATTCTTCCTTCAAATGCTTATGATCGAGCCAGTGCTAGATTTTGGGGTGCCTACATAGATGACAAGTTATATAATTCCCTACGAAATGGTTTATTTGCTCAAGACATTGAGTCAAAGAAGAAACATTTTGAGGAACTAGCAGAAGTGCTTTTGAAGTTGGAAGATGTATTGAACAAGAGCAGTGGAGGAAAGGACTTTTTTGGAGGAGAGAAAATTGGATTTGTTGATATTGCTTTTGGATGCTATTTGAGTTGGTTGAGGGTTAAAGAGAAATTTACTGGAGAGAAAGCTTTTGATGAAGCTAAAACTCCTTCTTTGGTAAAATGGGCTGAAGCTTTTGCTACTGATCCTGCTGTGAAGGGAATTCTACCAGAAACTGATAAACTTGTTGAGTATGCCTTAGCTATGGCTGCTGCTATTCCTAAGTAA 687 0.3726 MATNDLKLLGGWFSPFAVRAQIALSIKGLDYENIVENLNSKSDLFLQSNPVYKKIPVLIHGDKAICESAIIVEYIDEVWKNNGTPSILPSNAYDRASARFWGAYIDDKLYNSLRNGLFAQDIESKKKHFEELAEVLLKLEDVLNKSSGGKDFFGGEKIGFVDIAFGCYLSWLRVKEKFTGEKAFDEAKTPSLVKWAEAFATDPAVKGILPETDKLVEYALAMAAAIPK* 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1521 228 Pfam Glutathione S-transferase, N-terminal domain 6 77 IPR004045 -
Mtr5g1521 228 Gene3D - 88 227 - -
Mtr5g1521 228 Gene3D Glutaredoxin 1 87 - -
Mtr5g1521 228 SFLD Main.3: Omega- and Tau-like 2 226 IPR045073 -
Mtr5g1521 228 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 83 IPR004045 -
Mtr5g1521 228 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 5 220 IPR045073 -
Mtr5g1521 228 PANTHER GLUTATHIONE S-TRANSFERASE U17 5 220 - -
Mtr5g1521 228 CDD GST_N_Tau 6 79 - -
Mtr5g1521 228 SUPERFAMILY GST C-terminal domain-like 77 223 IPR036282 -
Mtr5g1521 228 SFLD Glutathione Transferase (cytosolic) 2 226 IPR040079 -
Mtr5g1521 228 Pfam Glutathione S-transferase, C-terminal domain 100 203 IPR004046 -
Mtr5g1521 228 SUPERFAMILY Thioredoxin-like 5 110 IPR036249 -
Mtr5g1521 228 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 91 222 IPR010987 -
Mtr5g1521 228 CDD GST_C_Tau 92 222 IPR045074 GO:0004364|GO:0006749
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1521 Mtr-Chr5 16280330 16281813 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g1521 1 219 Glutathione S-transferase Gene Family AT1G10360 55.708 8.18e-82 242
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1521 K00799 - gmx:547576 300.056
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g1521 5 16280330 16281813 Mtr5g1521 5 16280330 16281813 ECH
Mtr5g1521 5 16280330 16281813 Mtr8g1869 8 28367850 28369441 PCT