Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1519 ATGGACACACTTGAGAATAAAGCTGCTGAGTTAAACAAGGATTCTTTCAAGTATGCGTGGGTTCTTGACAAACTCAAGGCTGAGCGCGAAAGAGGTATCACAATTGACAATTCTATGTTGAATTTTGAGACAACCAAGTACCGCTGCACTATCATTGATGCCCCCGGACACAGGGATTTCATTAAGAACATGATTACTGGGACATCCCAAGCTGATTGTGCTCTTCTTATCGTTGATTCCACTCCTGCTGGTTTTGGAGCCGGTATTTCCAATAATGGTCAGATCCGTGAACATGCTCTCCATGCTTACTCTCTTGGTGTCAAGCAAATGATCTGCTGCTGCAACAAGATGGATGCCTTTGGTCACCTATCCTTCAAGAGTAGGTTTGAAGAAATTGTGAGTCAACTTTCATCAATTTTGATGAACGTTGGCTATAAACAAGACGAAGTTACATTTGTTCCCATCTCTGGTTTTGAGGGAGATAACTTGGTTGAGCCCTCTACAAAACTTGATGGGTACAAGGGTCCCACCCTTCTTGAAGCTCTTGACCGAATCAACGAGCCTAAGAGGCTATCAGACAAGCCTCTCCGATTACCACTTCAGGGTGTCTACAAGATTGGAGGAATTGGAGCTTTGGCTGCAGGATGTGTCAGGACTGGTGTCTTGAAACCTGGAATGGTGGTGACTTTTTCCCCAAATGGCCGGCAAGGTGAGGTGACGTCTGTGAAGATGGACCATGAAGATCTTTCCGAGGCCCTTCCTGGTGATAATGTGAGATTTGCTGTTGAGAATGTGTCTGATGCACATCTCAGCCGAGGCTATGTTGCCTCAAACTCCAAGCATCACCCAGCCAAGGAGGCCATTAACTTTACATCTCAAGTTATCATCACGAATCACCCTGGCCAAATTGAAAAGGGTTATACACCTGTTCTTAACTGCCACACCTCCTACATTGCTGTCAAGTTTGCTAAGCTTCTTGCCAAGGTAGACAGGTTTTCTGGCAAGATAATTGTGAAGGAGCCCAAATTCTTGAAGAAAGGTGATGGTGGCATTATTCAGATGATTCCCACCAAGCCCATGGTGGTAGAGACTTTTTCTGAATATCCTTCACTCGGCCGTTTTATTGTCAGAGATACGCATCAAACTGTGGCTATTGGAATCATCTTGGTTGTGAACAAGAAGGATCCTAGTGAAAGAGATATGGGGCAAACATCGCATGAGGGGTTGTTGAGCTTCACACTGCAGGTGTTGTTTGCATGA 1260 0.45 MDTLENKAAELNKDSFKYAWVLDKLKAERERGITIDNSMLNFETTKYRCTIIDAPGHRDFIKNMITGTSQADCALLIVDSTPAGFGAGISNNGQIREHALHAYSLGVKQMICCCNKMDAFGHLSFKSRFEEIVSQLSSILMNVGYKQDEVTFVPISGFEGDNLVEPSTKLDGYKGPTLLEALDRINEPKRLSDKPLRLPLQGVYKIGGIGALAAGCVRTGVLKPGMVVTFSPNGRQGEVTSVKMDHEDLSEALPGDNVRFAVENVSDAHLSRGYVASNSKHHPAKEAINFTSQVIITNHPGQIEKGYTPVLNCHTSYIAVKFAKLLAKVDRFSGKIIVKEPKFLKKGDGGIIQMIPTKPMVVETFSEYPSLGRFIVRDTHQTVAIGIILVVNKKDPSERDMGQTSHEGLLSFTLQVLFA* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1519 419 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 1 192 IPR000795 GO:0003924|GO:0005525
Mtr5g1519 419 CDD EF1_alpha_III 285 388 - -
Mtr5g1519 419 Pfam Elongation factor Tu C-terminal domain 284 391 IPR004160 -
Mtr5g1519 419 SUPERFAMILY Translation proteins 193 284 IPR009000 -
Mtr5g1519 419 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 289 389 IPR009001 -
Mtr5g1519 419 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 23 38 IPR031157 -
Mtr5g1519 419 Pfam Elongation factor Tu GTP binding domain 15 184 IPR000795 GO:0003924|GO:0005525
Mtr5g1519 419 PANTHER TRANSLATION FACTOR 2 401 - -
Mtr5g1519 419 Gene3D - 1 188 IPR027417 -
Mtr5g1519 419 PANTHER ELONGATION FACTOR 1-ALPHA 2 401 - -
Mtr5g1519 419 Gene3D Translation factors 285 392 - -
Mtr5g1519 419 PRINTS GTP-binding elongation factor signature 30 38 IPR000795 GO:0003924|GO:0005525
Mtr5g1519 419 PRINTS GTP-binding elongation factor signature 50 60 IPR000795 GO:0003924|GO:0005525
Mtr5g1519 419 PRINTS GTP-binding elongation factor signature 66 77 IPR000795 GO:0003924|GO:0005525
Mtr5g1519 419 PRINTS GTP-binding elongation factor signature 110 119 IPR000795 GO:0003924|GO:0005525
Mtr5g1519 419 CDD EF1_alpha_II 192 280 - -
Mtr5g1519 419 Gene3D Translation factors 192 278 - -
Mtr5g1519 419 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 4 210 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1519 Mtr-Chr5 16247770 16263608 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g1519 1 397 Eukaryotic Initiation Factors Gene Family AT5G60390 71.033 0.0 585
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1519 K03231 - rcu:8280642 575.859