Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1512 ATGAACCAGAGCGTTCCTTCATCTCGAAACGTTCGAATCGGCCGAGTCAAGCCTCAAGCTCCTGGTAACCGCACCATCTTCTGTAACGATCGGCTAGCCAATCATCATCTTCGATTCAAGGGGAATTCAATATCCACTACAAAGTACAACTTTTTCACTTTTTTGCCAAAAGGATTGTTTGAACAGTTCAGGCGGGTTGCTAATCTGTATTTTCTTACAATCTCTATTCTTTCTACCACACCAATCAGCCCCGTGTCTCCGATTACTAATGTGCTTCCTCTATCTATGGTGCTTCTTCTCTCTCTTATTAAGGAAGCTTTTGAGGATTGGAAACGTTTTCAAAATGACATGGCCATAAACAATAACATGATAGATATTTTGCAAGACAAAGAGTGGGTGTCTATACCATGGAAAAAATTGCAAGTTGGTGACATTGTTAAGGTTAAGCAGGATGGATTCATTCCTGCAGATTTGCTTTTCCTAGCTAGTACAAATGTAGATGGCGTCTGCTACATCGAGACTGCTAATTTGGATGGGGAAACCAATTTGAAGATTAGAAAAGCATTGGAAAAGACTTGGGATTACGTGACTCCAGAGAAGGCATCTGAATTTAAAGGTGAAATTCAGTGTGAACAACCAAACAATTCATTGTATACCTTCACTGGAAATCTTATAATTCAAGACCAAACACTTCCTCTCAGTCCAAATCAACTTCTGTTGCGAGGATGCAGCCTCAGGAATACAGGACATATTGTTGGGGTTGTTATTTTCACAGGACATGAAACAAAGGTGATGATGAATGCTATGAATGTTCCTTCCAAAAGAAGTACATTGGAGAGGAAGCTTGACAAGCTCATACTCACTCTATTTGCAACTCTCTTTATGATGTGTTTTATAGGAGCTATAGGCAGTGCTATCTTTGTAAACAAGAAGTATTTCTATTTGCATCTTGATTCATCAGAAGAGAACGGCTTAGCACAGTTCAATCCAAGAAATAGATTTGTGGTTTTTCTTCTGACCATGTTTACCCTCATCACTTTATACTCAACAATCATCCCCATTTCACTCTATGTATCGATAGAGATGATCAAATTTATTCAGTCCACTAAATTTATAAACAACGATTTGCGCATGTACCACTATGAAACCAATACTCCAGCATTGGCCAGAACTTCAAATTTGAATGAAGAACTTGGACAGGTTGAATACATCTTCTCAGACAAAACTGGGACTCTTACAAGAAACTTAATGGAGTTCTTCAAGTGCTCGATTGGAGGAGAGGTGTATGGAAATGGCGTGACTGAAATTGAAAAGGGAATAGCAGAGCGCAGGGGCATAAAACTAGAGGAAAATATTTCACTCAATGCAGTGCGAGAGAGGGGTTTCAATTTTGATGATGCCAGGCTCATGAGAGGAGCTTGGAGGAATGAGCCGAATCCTGATAGCTGCAAGGAATTCTTCAGATGCCTTGCTATTTGTCATACTGTGCTTCCTGAGGGAGACGAGTTCCCTGAAAAGATCAGATACCAAGCTGCATCACCTGATGAGGCTGCTTTGGTTATTGCTGCAAAAAACTTCGGTTTTTTCTTTTACAGACGTACACCTACAAAGATATATATTCGTGAATCTCATGCTGAGAAGATGGACAAAATTCAAGATGTCTCGTATGAGATTCTGAATGTGCTTGAGTTTAACAGTACAAGGAAGCGTCAATCGGTTGTGTGCCGTTATCCGGATGGGAAGCTTGTATTGTACTGTAAGGGTGCTGACAATGTAATCTATGAGAGATTAGTTGCTGGTTCTAATGATATTAAAAAAGTTACTAGGGAGCATTTGGAACAGTTTGGATCTGCTGGTCTACGCACATTATGCCTAGCGTACAAAGAATTACATCCTGATGTTTATGAAAGCTGGAATGAGAAATTCCTTCAAGCTAAATCCTCTCTAAGTGATCGGGAAAAGAAGTTAGATGAGGTGGCAGAACTTATAGAAAATGATCTCATTTTGATTGGTAGCACTGCCATAGAAGACAAGCTTCAAGATGGAGTACCAGCCTGCATAGACACTCTTCAAAGAGCTGGCATAAAAATTTGGGTGCTTACAGGGGACAAGATTGAAACAGCAATCAATATTGCCTATGCTTGCAATTTAATAAACAACGAGATGAAGCAATTCATTATCAGTTCAGAAACTGATGCAATTAGAGAAGTTGAAGACAGGGGGGACCAAGTAGAAACTGCGCGATTTATTAGAGAAGAAGTTATGAAAGAGCTGAAGAAGTGCCTTGATGAAGTACAGAGCTATTTTAGCTCTTTATCTGCACCAAAATTAGCACTTGTAATTGATGGAAAATGTCTAACGTATGCACTGGATTCAAGTTTGAGAGTCATGCTGCTGAATTTGAGTTTGAATTGCCATGCTGTTGTTTGCTGCCGAGTTTCTCCTTTGCAGAAAGCACAGGTCACAACTTTGGTCAAGAAAGGTGCACGGAAAATAACACTTGGTATTGGTGATGGTGCCAATGATGTTAGCATGATTCAAGCTGCTCATGTTGGTGTTGGAATAAGCGGGATGGAGGGTATGCAAGCAGTAATGGCTAGTGATTTTGCAATTGCACAGTTTCGTTACCTTGCAGATTTACTTCTTGTTCATGGCCGGTGGTCATATCTTCGAATATGCCAGGTGGTGATGTACTTCTTTTACAAGAATCTCACTTTCACTCTTACTCAGTTTTGGTTTAACTTGCAAACTGGGTTTTCCGGCCAGAGATTCTATGATGATTGGTTTCAGTCATTGTATAACGTTATCTTCACTGCGCTTCCTGTGGTCATGGTTGGCCTATATGACAAGGATGTTAGTGCATCTATATCCATGAAGTATCCTGAACTATACATGGATGGAATAAGAGATGTCTTTTTTAAATGGAGAGTTGTGGCTATAAGGGCATTTCTTTCCGTTTACCAGTCTCTAATATTCTTCTATTTTGTGAGTTCTTCAAGTTTAAGTGCTAAAAATTCAGATGGCAAGATATTTGGACTCTGGGATGTTAGTACTATGGCCTTCACATGTGTTGTAGTAACTGTTAACTTTCGACTTCTGATGAACTGTAATTCAATCACAAGATGGCACTATATTAGTGTTGGTGGAAGTATATTAGGATGGTTTCTTTTTGTTTTCTTATATTCAGGGATCAGAACTCGTTATGATCGACAGGAGAATGTGTATTTTGTCATATATGTCTTGATGAGTACGTCTTATTTCTACATTATGCTAATTCTTGTCCCTGTTGCGGCACTTTTTTGTGACTTTCTTTATCTAGGGGTTCAGAGATGGTTCTTCCCTTATGATTATCAAATTATTCAAGAACTGCATAGACATGAGAGTGATGACTCTGCCAGTGTCCGACTGCTAGAGTCAGGGAACCAGACTCCGTCTGACGAAAGAAGCCATGAAATATCTCAACTCCCACGTGAAGTATCAACGCACACAGGGTTTGCTTTTGATTCGCCTGGTTATGAGTCATTTTTTGCTTCACAGCTTGGTATACGCCCCCAAAAGGCCTGGGATGTCGCAAGACGTGCTAGCACAAGATCCAGGGCGAAGAATGTACAAAAAAAGTAA 3621 0.3993 MNQSVPSSRNVRIGRVKPQAPGNRTIFCNDRLANHHLRFKGNSISTTKYNFFTFLPKGLFEQFRRVANLYFLTISILSTTPISPVSPITNVLPLSMVLLLSLIKEAFEDWKRFQNDMAINNNMIDILQDKEWVSIPWKKLQVGDIVKVKQDGFIPADLLFLASTNVDGVCYIETANLDGETNLKIRKALEKTWDYVTPEKASEFKGEIQCEQPNNSLYTFTGNLIIQDQTLPLSPNQLLLRGCSLRNTGHIVGVVIFTGHETKVMMNAMNVPSKRSTLERKLDKLILTLFATLFMMCFIGAIGSAIFVNKKYFYLHLDSSEENGLAQFNPRNRFVVFLLTMFTLITLYSTIIPISLYVSIEMIKFIQSTKFINNDLRMYHYETNTPALARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEVYGNGVTEIEKGIAERRGIKLEENISLNAVRERGFNFDDARLMRGAWRNEPNPDSCKEFFRCLAICHTVLPEGDEFPEKIRYQAASPDEAALVIAAKNFGFFFYRRTPTKIYIRESHAEKMDKIQDVSYEILNVLEFNSTRKRQSVVCRYPDGKLVLYCKGADNVIYERLVAGSNDIKKVTREHLEQFGSAGLRTLCLAYKELHPDVYESWNEKFLQAKSSLSDREKKLDEVAELIENDLILIGSTAIEDKLQDGVPACIDTLQRAGIKIWVLTGDKIETAINIAYACNLINNEMKQFIISSETDAIREVEDRGDQVETARFIREEVMKELKKCLDEVQSYFSSLSAPKLALVIDGKCLTYALDSSLRVMLLNLSLNCHAVVCCRVSPLQKAQVTTLVKKGARKITLGIGDGANDVSMIQAAHVGVGISGMEGMQAVMASDFAIAQFRYLADLLLVHGRWSYLRICQVVMYFFYKNLTFTLTQFWFNLQTGFSGQRFYDDWFQSLYNVIFTALPVVMVGLYDKDVSASISMKYPELYMDGIRDVFFKWRVVAIRAFLSVYQSLIFFYFVSSSSLSAKNSDGKIFGLWDVSTMAFTCVVVTVNFRLLMNCNSITRWHYISVGGSILGWFLFVFLYSGIRTRYDRQENVYFVIYVLMSTSYFYIMLILVPVAALFCDFLYLGVQRWFFPYDYQIIQELHRHESDDSASVRLLESGNQTPSDERSHEISQLPREVSTHTGFAFDSPGYESFFASQLGIRPQKAWDVARRASTRSRAKNVQKK* 1207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1512 1206 ProSitePatterns E1-E2 ATPases phosphorylation site. 407 413 IPR018303 -
Mtr5g1512 1206 SUPERFAMILY Calcium ATPase, transduction domain A 122 265 IPR008250 -
Mtr5g1512 1206 SFLD p-type atpase 387 887 IPR044492 -
Mtr5g1512 1206 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 809 915 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Mtr5g1512 1206 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 412 674 IPR023299 GO:0000166
Mtr5g1512 1206 PRINTS P-type cation-transporting ATPase superfamily signature 405 419 - -
Mtr5g1512 1206 PRINTS P-type cation-transporting ATPase superfamily signature 836 855 - -
Mtr5g1512 1206 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 7 1202 - -
Mtr5g1512 1206 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 39 1122 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Mtr5g1512 1206 SFLD Haloacid Dehalogenase 387 887 - -
Mtr5g1512 1206 Gene3D - 669 876 IPR023214 -
Mtr5g1512 1206 Gene3D - 515 668 IPR023299 GO:0000166
Mtr5g1512 1206 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 7 1202 - -
Mtr5g1512 1206 Pfam Phospholipid-translocating ATPase N-terminal 26 90 IPR032631 -
Mtr5g1512 1206 Pfam E1-E2 ATPase 122 361 - -
Mtr5g1512 1206 Gene3D - 104 269 - -
Mtr5g1512 1206 Pfam Cation transport ATPase (P-type) 508 596 - -
Mtr5g1512 1206 Pfam Phospholipid-translocating P-type ATPase C-terminal 864 1114 IPR032630 -
Mtr5g1512 1206 SUPERFAMILY Calcium ATPase, transmembrane domain M 32 1114 IPR023298 -
Mtr5g1512 1206 CDD P-type_ATPase_APLT_Dnf-like 41 996 - -
Mtr5g1512 1206 SUPERFAMILY HAD-like 400 892 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1512 Mtr-Chr5 16147208 16164969 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g1512 2 1205 Primary Pumps ATPases AT1G59820 76.783 0.0 1964
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1512 K14802 - gmx:100815547 2127.44