Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1489 ATGGAGACAAACAGTGTTGTTTCTATTGGTGTTGATTCTCAAGAGGTTCATGTTTTGGCTGTTGATGATAGTCTTGTTGATAGAAAAGTTATTGAAAGGTTGCTCAAAATTTCAGCTTGTAAAGTTACTGCAGTGGATAGTGGAATAAGAGCACTACAATTTCTGGGTTTGGTTGATGAGAAAGAGACTTCTGAATCTGATGCTTTTGTTCCGGGTTTAAAGGTGGATCTAGTAATTACAGATTATTGCATGCCAGGAATGACTGGTTATGAGTTGCTTAAGAAAATCAAGGAATCAACCACTTTTAGAGCAATTCCAGTAGTGATTATGTCTTCTGAAAATATCTTGCCACGCATTGACAGATGTTTGGAGGAAGGTGCAGAGGATTTTATAGTGAAGCCAGTGAAATTATCTGACGTGAAACGTTTGAAGGGTTACATGACAACTAAGGAGGTTAATGTGGGAAGCCAAGACACTGAAGTTATCGTTACCAACAATGTTGGTAACGATAACGATGGTGATGGTGTAGGGATAGGTATCAACAACAAAAGGAAGTTAGAAGAAGCATCTGATCTATCATCATCTGAACCATCAATTTCATCATCGACACTTTCATCACCATCATCATCACCGTCACCTTCATCATCACCGTTGTCTTCACCCGACGTTCTTGATTCTCCAATCAGACGGCTTAAAATGACCGGCACCGAATGA 714 0.395 METNSVVSIGVDSQEVHVLAVDDSLVDRKVIERLLKISACKVTAVDSGIRALQFLGLVDEKETSESDAFVPGLKVDLVITDYCMPGMTGYELLKKIKESTTFRAIPVVIMSSENILPRIDRCLEEGAEDFIVKPVKLSDVKRLKGYMTTKEVNVGSQDTEVIVTNNVGNDNDGDGVGIGINNKRKLEEASDLSSSEPSISSSTLSSPSSSPSPSSSPLSSPDVLDSPIRRLKMTGTE* 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1489 237 SMART REC_2 16 147 IPR001789 GO:0000160
Mtr5g1489 237 CDD REC_typeA_ARR 18 143 - -
Mtr5g1489 237 MobiDBLite consensus disorder prediction 192 222 - -
Mtr5g1489 237 Gene3D - 16 173 - -
Mtr5g1489 237 PANTHER TWO-COMPONENT RESPONSE REGULATOR 10 236 IPR045279 GO:0009736
Mtr5g1489 237 MobiDBLite consensus disorder prediction 187 237 - -
Mtr5g1489 237 Pfam Response regulator receiver domain 18 140 IPR001789 GO:0000160
Mtr5g1489 237 ProSiteProfiles Response regulatory domain profile. 17 148 IPR001789 GO:0000160
Mtr5g1489 237 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR3-RELATED 10 236 - -
Mtr5g1489 237 SUPERFAMILY CheY-like 16 142 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1489 Mtr-Chr5 15830002 15831544 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g1489 11 229 Response Regulator Gene Family AT1G59940 55.459 3.57e-72 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mtr5g1489 Response_reg 2e-20 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1489 K14492 - gmx:100779833 284.263
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g1489 5 15830002 15831544 Mtr5g1489 5 15830002 15831544 ECH