Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1473 ATGCCAACCCTTGTTCAATTCTTGATACTAGTTTTACTATTGTTCAATTTTGTGTCAGTTTTATCCCAAGTTAACCAGTTCTTGTATGCAGGATTCAAGGATGTTGGTCCCAACAATCTTACCTTGAATGGTTTTGCAGAGATAGAGAAAAATGGGATGATAAGATTAACAAATCACACAAACAATGAAATGGGCCATGCTTTTTACTCATTACCTTTTCAGCTAAGGAACTCGACAACTCGTAAAGCTTACTCATTTTCTTCATCTTTTGCTCTTGCTGTTGTCCCTGAGTATCCTAATATAGGTGGTCATGGCATGGCTTTCACAATAGCAACTACTAAGGATCTCGAAGGTTCGCCTCTTCAGTATCTTGGTCTTTTCAATTCGAGTAATGTTGGTAATTTTTCGAACCATCTTTTTGCTGTTGAATTTGACACTGTCTTAGACTTTGGGTTTGATGATATTAATGATAACCATGTTGGTATAGACATCAATGGTTTGAAATCCAAAGCATATGTTACTGCTGGCTATTATATTGATAATGATTCAACCAAACAACAACATCTTGATATCAAAAGTGGGAAACCAATTCTAGCTTGGGTTGATTATGATTCTTCAATAAATCTTGTTAGTGTTACACTTTCTCCAACTTCAACAAAACCAAAAAAACCAACTTTGTCCTTTCATACCGATCTATCGCCTATTTTTCATGATACTATGTATGTTGGATTCTCTGCATCAACTGGTTTACAGCTTGCTAGCTCTCATTACATCTTGGGTTGGAGCTTTAAAATCAACGGACCGGCACCACCACTTGATTTGTCTTCACTCCCACAACCTCCTCGACCAAAGAAGAAAAAAACTTCTATGATAATCAGTGTTTCGGTCACAGTTTTTTTTGTTGTATTGTGTTCAATAGCAATTGGTATTTACATTTTTAGAAAAATCAAGAATGCTGATGTAATAGAACCATGGGAGCTTGAAGTTGGGCCACATAGATACTCCTATCAAGAGCTCAACAAAGCTACAAAAGGTTTCAAGGAGAAAGAGCTACTTGGGCAGGGTGGTTTTGGAAGAGTTTACAAAGGGACATTGCCAGATTCAAATATTCAAGTAGCTGTTAAGAGATTTTCACATGAATCAAAACAAGGGCTTAGGGAATTCGTGTCTGAAATCGCCAGCATAGGCCGGCTTCGTCACAGGAATTTAGTTCAGCTACTTGGATGGTGTCGCTGCAAAGGCGACCTGCTACTTGTGTATGACTTCATGGCTAATGGAAGCTTAGATAAGTACTTGTTTGAAAACACAGAAATTGTGTTAAGTTGGGAACAAAGGTTCAAGATAATAAAGGGTGTTGCTTCAGGCCTTTTGTATCTACATGAAGGCTATGAGCAAGTTGTAATACACAGAGATGTTAAGGCTAGCAATGTTCTTTTAGACTTTGAACTCAACGGAAGATTAGGTGATTTTGGTTTGGCAAGGTTATATGAACACGGTGCTAATCCAGGGACCACAAGAGTGGTGGGAACCTTAGGCTATTTGGCACCGGAATTACCTAGAACAGGAAGAGCATCAACGAGTTCAGACGTTTTTGCATTTGGTGCACTTCTGCTTGAGGTAGCTTGTGGGAGAAGGCCTATTGAGCCTAAGGCATTGCAAGAAGAGTTAGTGTTGGTGGATTGGGTGTGGGAAAAGTACAAAGAAGGAAGAATACTTGAAGTAGTGGATCGTAAATTGAATCGAAATTTTGATGAAAGTGAGGTAGTGCTTGTGTTGAAATTAGGATTGTTATGTTCAAATGATGTTCCTTTTGTTAGACCTAGCATGAGACAAGTGATGAGGATTTTGGATGGAGAAGTTGAGTTGCCTGATGATTTGAGTAATCCAGGAGTTATTGATCCACAACAGGGGTTTGATGAATTTTTGCACTCTGCATATTCCTCATTTGATATCATGGATTCAAGCTCTTATCTTGAAAATAGATATACAGATGGTACTTGTTATATCTCTTTTGAGAGTTCACCTCAATCACTTCTCAATTCTAGAGAGGAAAAAAGGTGA 2061 0.3833 MPTLVQFLILVLLLFNFVSVLSQVNQFLYAGFKDVGPNNLTLNGFAEIEKNGMIRLTNHTNNEMGHAFYSLPFQLRNSTTRKAYSFSSSFALAVVPEYPNIGGHGMAFTIATTKDLEGSPLQYLGLFNSSNVGNFSNHLFAVEFDTVLDFGFDDINDNHVGIDINGLKSKAYVTAGYYIDNDSTKQQHLDIKSGKPILAWVDYDSSINLVSVTLSPTSTKPKKPTLSFHTDLSPIFHDTMYVGFSASTGLQLASSHYILGWSFKINGPAPPLDLSSLPQPPRPKKKKTSMIISVSVTVFFVVLCSIAIGIYIFRKIKNADVIEPWELEVGPHRYSYQELNKATKGFKEKELLGQGGFGRVYKGTLPDSNIQVAVKRFSHESKQGLREFVSEIASIGRLRHRNLVQLLGWCRCKGDLLLVYDFMANGSLDKYLFENTEIVLSWEQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDFELNGRLGDFGLARLYEHGANPGTTRVVGTLGYLAPELPRTGRASTSSDVFAFGALLLEVACGRRPIEPKALQEELVLVDWVWEKYKEGRILEVVDRKLNRNFDESEVVLVLKLGLLCSNDVPFVRPSMRQVMRILDGEVELPDDLSNPGVIDPQQGFDEFLHSAYSSFDIMDSSSYLENRYTDGTCYISFESSPQSLLNSREEKR* 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1473 686 Pfam Legume lectin domain 26 277 IPR001220 GO:0030246
Mtr5g1473 686 CDD STKc_IRAK 352 618 - -
Mtr5g1473 686 SMART serkin_6 346 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g1473 686 SUPERFAMILY Concanavalin A-like lectins/glucanases 26 286 IPR013320 -
Mtr5g1473 686 PANTHER - 8 660 - -
Mtr5g1473 686 ProSitePatterns Serine/Threonine protein kinases active-site signature. 467 479 IPR008271 GO:0004672|GO:0006468
Mtr5g1473 686 SUPERFAMILY Protein kinase-like (PK-like) 328 635 IPR011009 -
Mtr5g1473 686 ProSiteProfiles Protein kinase domain profile. 346 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g1473 686 CDD lectin_legume_LecRK_Arcelin_ConA 26 267 IPR001220 GO:0030246
Mtr5g1473 686 Gene3D Transferase(Phosphotransferase) domain 1 423 628 - -
Mtr5g1473 686 Gene3D Phosphorylase Kinase; domain 1 331 422 - -
Mtr5g1473 686 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.4 8 660 - -
Mtr5g1473 686 ProSitePatterns Protein kinases ATP-binding region signature. 352 375 IPR017441 GO:0005524
Mtr5g1473 686 Gene3D - 24 269 - -
Mtr5g1473 686 Pfam Protein kinase domain 346 554 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1473 Mtr-Chr5 15538218 15540516 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g1473 20 657 Receptor kinase-like Gene Family AT3G55550 59.660 0.0 753
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Mtr5g1473 Pkinase 1.3e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1473 - - gmx:100784346 992.26