Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1469 ATGCCGGGACGACGGTCGAAGTCGGAGAAGAAAGACACCGCCGACGCCGACGGCGAGAAACAGCTCCGGCGAGACCCGTATGAAGTCCTTGGCGTTTCCAGGAACTCTACCGATCAAGAAATTAAATCTGCTTATCGGAAATTGGCTCTTAAGTTTCATCCTGACAAGAATGCTAATGATCCCAAAGCAGCTGATTTGTTCAAAGAGGCTACCTTTTCTTATAATCTCTTGTCGGATCCTGACAAACGGCGCCAGTATGACTCATCTGGCTTTGAGGCCGTAGAATCAGATAGCCAAGAGTTAGAATTGGATCTTTCAAGTTTGGGTGCTGTCAACACAATGTTTGCTGCACTTTTTAGCAAACTTGGTGTACCAATTAAGACAACTGTATCTGCGACTATTTTGGAAGAGGCACTCAATGGTTCAGTTACAATTCGTCCACTTCCATTGGGACAATTCGTATCTAAAAGGGTTGAGAAGCAATGTGCACATTTCTATTCAGTTACAATAACAGAAGAGGAAGCAAGAGCTGGATTTGTTTGTCGAGTGCAATCATCAGACAAAAGCAAATTCAAGTTATTATATTTCGACCAGGAGGAAAATGGTGGCTTAAGTCTTGCTCTCCAGGAAGACAGCACAAAAAATGGGAAGGTTACCTCTGCTGGAATGTATTTTCTTGGTTTTCCTGTTTATCGACTAGATCAAACAATGAACACCATAGCTGCTTCTAAAGATCCAGATACATCGTTTTTCAAAAAGCTTGATGGGTTCCAGCCCTGTGAATTAACTGAGTTGAAGGCTGGTACCCATATATTTGCAGTTTATGGTGACAACTTTTTTAAAAGTGCAAACTATACAATAGAAGTCCTGTGTGCTGCACCCTTTAGCGAAGAAAAAGAAAATTTAAGAAATGTAGAAACTCAAATTTTGTCGAAAAGAGCCGAAATATCAAAGTTTGAATCAGAATATCGAGAGGTTCTAGCACAATTTACCGAGATGACAAGCAGATATGCACATGAAATGCAAACTATTGACGAGCTATTGAAACAAAGAAATGAAATACATGCCTCATACACGGTTGTTCCTTTAAAGCGGAGCAATAGCAGCAAAAGCAGAAGTAAAACATCTCTGAAGGAATCAAAAGAAGATGGCGAAACAAGAGAAAAGAGGAATACAAGAGAACGACCGAGGAAGAAGAAATGGTATAACCTTCACTTAAGAGTTGATAAGAGAAAGGCTTGCTAA 1245 0.4056 MPGRRSKSEKKDTADADGEKQLRRDPYEVLGVSRNSTDQEIKSAYRKLALKFHPDKNANDPKAADLFKEATFSYNLLSDPDKRRQYDSSGFEAVESDSQELELDLSSLGAVNTMFAALFSKLGVPIKTTVSATILEEALNGSVTIRPLPLGQFVSKRVEKQCAHFYSVTITEEEARAGFVCRVQSSDKSKFKLLYFDQEENGGLSLALQEDSTKNGKVTSAGMYFLGFPVYRLDQTMNTIAASKDPDTSFFKKLDGFQPCELTELKAGTHIFAVYGDNFFKSANYTIEVLCAAPFSEEKENLRNVETQILSKRAEISKFESEYREVLAQFTEMTSRYAHEMQTIDELLKQRNEIHASYTVVPLKRSNSSKSRSKTSLKESKEDGETREKRNTRERPRKKKWYNLHLRVDKRKAC* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1469 414 Pfam DnaJ domain 25 87 IPR001623 -
Mtr5g1469 414 PRINTS DnaJ domain signature 27 45 IPR001623 -
Mtr5g1469 414 PRINTS DnaJ domain signature 45 60 IPR001623 -
Mtr5g1469 414 PRINTS DnaJ domain signature 62 82 IPR001623 -
Mtr5g1469 414 PRINTS DnaJ domain signature 82 101 IPR001623 -
Mtr5g1469 414 MobiDBLite consensus disorder prediction 1 35 - -
Mtr5g1469 414 ProSiteProfiles dnaJ domain profile. 25 90 IPR001623 -
Mtr5g1469 414 Gene3D DnaJ domain 8 108 IPR036869 -
Mtr5g1469 414 PANTHER DNAJ DOMAIN-CONTAINING PROTEIN-RELATED 1 413 - -
Mtr5g1469 414 CDD DnaJ 25 79 IPR001623 -
Mtr5g1469 414 Coils Coil 302 322 - -
Mtr5g1469 414 MobiDBLite consensus disorder prediction 372 392 - -
Mtr5g1469 414 SUPERFAMILY Chaperone J-domain 24 94 IPR036869 -
Mtr5g1469 414 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN) 1 413 - -
Mtr5g1469 414 SMART dnaj_3 24 82 IPR001623 -
Mtr5g1469 414 MobiDBLite consensus disorder prediction 1 27 - -
Mtr5g1469 414 MobiDBLite consensus disorder prediction 365 402 - -
Mtr5g1469 414 ProSitePatterns Nt-dnaJ domain signature. 67 86 IPR018253 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1469 Mtr-Chr5 15465010 15469904 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g1469 23 88 C2H2 Transcription Factor Family AT1G74250 45.070 7.82e-11 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1469 - - gmx:100800929 719.539
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g1469 5 15465010 15469904 Mtr5g1469 5 15465010 15469904 ECH