Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1459 ATGGCTGAAGCTGTGCTTGAACTTCTCCTTGACAATTTCAACTCACTCGTTCAGAAGGAGCTTGGCCTATTTCTTGGTTTCGAAAATGACTTTAAAAGTCTTTCAAGCTTGCTCACTACAATCAAGGCTACGCTTGAAGATGCTGAGGAGAAGCAATTCACTGATCCTGTTCATGGCAAAGCTATCAAGGATTGGCTACTTAAGCTTAAAGATGCTGCTTACGTCCTCGATGATATCTTGGAAGAGTGTGCCACCAAAGCACTAGAGTTGGAGTACAAAGGATCCAAGGGTGGACTACGTCATAAGCTACATAGCTCTTGTTTATGTTCTCTTCATCCAAAGCAAGTTGCTTTCCGTTACAAAATTGCTAAGAAAATGAAGAACATACGAGAGAGGTTAGATGAAATAGCTGCAGAAAGAATCAAATTTCATTTGACCGAGATAGTCAGAGAGAAGAGAAGCGGAGTCCCTAATTGGCGCCAAACAACCTCAATCATTTCTCAACCTCAAGTCTATGGAAGAGATAAAGATATGGATAAAATTGTAGATTTTTTGGTTGGTGAAGCTTCTGGTCTTGAGGATTTGTGTGTTTATCCAATTGTTGGTATAGGTGGACTTGGAAAAACAACACTTGCCCAACTTATCTTCAATCACGAGAGGGTGGTCAAACACTTTGAGCCGAGAATTTGGGTTTGTGTTTCAGAAGATTTTAGTTTGAAGAGAATGACTAAAACGATAATCGAAGCGACATCTAAGAAGTCATGTGGTATTTTGGATCTAGAGACACTACAAACAAGACTTCAAGACCTGCTTCAAGGAAAAAGATTTTTGCTTGTATTGGACGATGTATGGGACGTTAAACAAGAGAATTGGCAAAAATTGAGATCTGTTTTGGCTTGTAGAGGAAAGGGTTCTTCAATTTTGGTCACTACTCGTCTTTTGAAGGTAGCAGAAATCATGCGAACAATACCTCCACATGATATATCGAAGCTATCTGACGAAGATTGTTGGGAATTGTTTAAACAAAATGCTTTTGGAACAAATGAGGTAGAACGGGAAGAGCTAGTGGTCATAGGAAAGGAGATACTAAGGAAATGTGGGGGAGTACCTCTTGCAGCAAAAGCACTAGGAAGTCTCTTGCGCTTTAAAAGAGAGGAAAAGGAGTGGCGCTATATCAAGGAAAGCAAAATATGGAATTTACAAGATGAAGAAAATGTCATGCCTGCATTGAGATTAAGTTTACTTGAATTTGCCAGTTAA 1260 0.3952 MAEAVLELLLDNFNSLVQKELGLFLGFENDFKSLSSLLTTIKATLEDAEEKQFTDPVHGKAIKDWLLKLKDAAYVLDDILEECATKALELEYKGSKGGLRHKLHSSCLCSLHPKQVAFRYKIAKKMKNIRERLDEIAAERIKFHLTEIVREKRSGVPNWRQTTSIISQPQVYGRDKDMDKIVDFLVGEASGLEDLCVYPIVGIGGLGKTTLAQLIFNHERVVKHFEPRIWVCVSEDFSLKRMTKTIIEATSKKSCGILDLETLQTRLQDLLQGKRFLLVLDDVWDVKQENWQKLRSVLACRGKGSSILVTTRLLKVAEIMRTIPPHDISKLSDEDCWELFKQNAFGTNEVEREELVVIGKEILRKCGGVPLAAKALGSLLRFKREEKEWRYIKESKIWNLQDEENVMPALRLSLLEFAS* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1459 419 Gene3D - 330 414 IPR042197 -
Mtr5g1459 419 Gene3D - 5 137 - -
Mtr5g1459 419 PANTHER DISEASE RESISTANCE PROTEIN RP 21 413 IPR044974 GO:0006952
Mtr5g1459 419 Pfam Rx N-terminal domain 5 95 IPR041118 -
Mtr5g1459 419 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 154 414 IPR027417 -
Mtr5g1459 419 Pfam NB-ARC domain 175 394 IPR002182 GO:0043531
Mtr5g1459 419 PANTHER OS01G0808000 PROTEIN 21 413 - -
Mtr5g1459 419 PRINTS Disease resistance protein signature 197 212 - -
Mtr5g1459 419 PRINTS Disease resistance protein signature 270 284 - -
Mtr5g1459 419 PRINTS Disease resistance protein signature 366 380 - -
Mtr5g1459 419 CDD RX-CC_like 2 137 IPR038005 -
Mtr5g1459 419 Gene3D - 156 323 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1459 Mtr-Chr5 15339594 15344747 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g1459 200 388 WRKY Transcription Factor Family AT5G45050 25.743 1.41e-06 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1459 - - mtr:MTR_5g035280 610.142