Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1457 ATGTCGATTTCATACTCCAACTTCTTCACCGACTCCGACCTCTTATGCGGCGAGGAAACCTCCAGCATCTTATCGTCAGATTCGCCGACGGAATCCTTCTCCGATGGTGAATCTTATCCGCCGCCGGAGGATGAGTTCATCGCCGGATTAATCGAAGACGAAGGTAAATTCGTCATCGGATTCGATTATTTCGTGAAGATGAAATCTAGCTCGTTCGATTCCGATGCTAGAGATGAATCCATTCGATGGATCCTAAAGGTGCAGGGTTATTATGGTTTTCAACCGGTTACGGCGTATCTTGCCGTGAACTATATGGATCGGTTCTTGAATTCTCGGCGGTTGCCGCAAACAAATGGGTGGCCACTGCAACTTCTATCAGTTGCTTGCTTGTCTTTAGCTGCAAAGATGGAAGAAACTTTAGTCCCTTCTCTATTGGACCTTCAGGTAGAAGGTGTCAAATACATGTTTGAACCCATAACAATTAGAAGAATGGAGCTACTTGTTCTAAGTGTCTTGGATTGGAGGCTAAGATCAGTTACCCCATTTAGCTTCCTCAGTTTCTTTGCGTGCAAGTTAGATTCAACTTCAACTTTTACTGGGTTTCTCATTTCACGAGCTACACAAATTATCTTATCTAAAATCCAAGAGGCCAGCATTCTTGCATATTGGCCCTCATGCATTGCTGCCGCGGCTATACTCTATGCAGCTAACGAAATTCCTAATTGGTCTCTCGTTGAGCCCGAGCATGCCGAGTCGTGGTGCGAGGGGCTAAGAAAAGAGAAAATTATAGGGTGCTACCAGTTGATGCAAGAACTTGTGATTGACAATAACCAAAGGAAACCCCCTAAAGTGTTGCCACAAATGCGAGTGACAATCCAGCCCCTTATGAGGTCATGTGTCTCGTCATCTTCCTCTTCTCCTTCCTCATCATCATCATCCTATAAAAGAAGGAAATTAAATAACTGTTTGTGGGTAGATGATGACAAAGGATCAAACTCCCAATGA 1005 0.4428 MSISYSNFFTDSDLLCGEETSSILSSDSPTESFSDGESYPPPEDEFIAGLIEDEGKFVIGFDYFVKMKSSSFDSDARDESIRWILKVQGYYGFQPVTAYLAVNYMDRFLNSRRLPQTNGWPLQLLSVACLSLAAKMEETLVPSLLDLQVEGVKYMFEPITIRRMELLVLSVLDWRLRSVTPFSFLSFFACKLDSTSTFTGFLISRATQIILSKIQEASILAYWPSCIAAAAILYAANEIPNWSLVEPEHAESWCEGLRKEKIIGCYQLMQELVIDNNQRKPPKVLPQMRVTIQPLMRSCVSSSSSSPSSSSSSYKRRKLNNCLWVDDDKGSNSQ* 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1457 334 SUPERFAMILY Cyclin-like 160 279 IPR036915 -
Mtr5g1457 334 Gene3D - 50 240 - -
Mtr5g1457 334 Pfam Cyclin, N-terminal domain 50 176 IPR006671 -
Mtr5g1457 334 Pfam Cyclin, C-terminal domain 179 288 IPR004367 -
Mtr5g1457 334 ProSitePatterns Cyclins signature. 77 108 IPR006671 -
Mtr5g1457 334 SMART cyclin_7 82 170 IPR013763 -
Mtr5g1457 334 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 1 321 - -
Mtr5g1457 334 SUPERFAMILY Cyclin-like 41 176 IPR036915 -
Mtr5g1457 334 CDD CYCLIN 81 169 IPR013763 -
Mtr5g1457 334 Gene3D - 60 177 - -
Mtr5g1457 334 PANTHER CYCLINS 1 321 IPR039361 -
Mtr5g1457 334 SMART Cyclin_C_2 179 308 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1457 Mtr-Chr5 15288464 15292916 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g1457 1 333 Core Cell Cycle Gene Families AT1G70210 57.941 1.33e-126 364
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1457 K18810 - gmx:100780369 489.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g1457 5 15288464 15292916 Mtr5g1457 5 15288464 15292916 ECH