Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1454 ATGGCTGAAGCTGTGCTTGAAGTTGTCCTTGACAATTTGAGCTCACTCGTTCAGAAGGAGATTGGCCTATTTCTTGGTTTCGAGAAAGACTTCAAAAGTCTTTCAAGCTTGCTCACTACAATCAAGGCTACTCTTGAAGATGCTGAGGAGAAACAGTTCACTTACAAAGCTATCAAGGATTGGCTGCTTAAGCTTAAAGATGCTGCTTATGTCCTCGACGACATCTTGGATGAGTGTGCCACTCAAGCATTGGAGATGGAGTACAAAGGATCCAAGGGTAAACCTTCGCATACGGTACAAAGCTTTTTCGTATCTTCTTTTCATCCTAAGCATGTTGCTTTCCGTTACAAACTTGCTAAGAAAATGAAAAGAATAAGAGAGAGATTGGATGAAATAGCTGAAGAAAGGAGTAAGTTTCATTTGACTGAGATAGTGAGAGAGAGAAGAAGCGGGGTTCTTGACTGGCGACAAACCACCTCAAATATCACTCAACCTCAAGTTTTTGGAAGAAATGAAGATAAGGATCAAATTGTAGACTTTTTGGTTGATGATGCGTATACTTGTGAGGATTTATCAGTCTATCCAGTAGTAGGTCTTGGTGGACTTGGGAAAACAACACTTGCCCAAGTTGTGTTCAATCATGAGAAGGTAGTCAAACACTTTGAGCTAAGAATTTGGGTATGTGTTTCAGAAGATTTCAGTTTGAAGAGAATGACAAAAGGCATCATAGAAGCTGCATCTGGCCATGCTTGTGAGGATTTAGATCTAGAGCCGTTGCAAAGAAAACTGTTGGATTTGCTACGAAGAAAAAGATATTTGCTGGTGTTGGATGATGTATGGGATGATGGACAAGAGAATTGGCAGAGATTGAAATCTGTATTGGCTTGCGGAGGCAAGGGTGCTTCGGTTTTGGTAACCACTCGTCTTCCAAAGGTTGCAGCAATCATGGGAACAATGCCCTCTCATGATTTATCAATGCTATCTGACACAGATTGCTGGGAATTGATTAAGCAGCGAGCATTTGGACCAAATGAGGATGAACGGCCCGATCTTGTGGTCATAGGGAAGGAGATAGTAAAAAAGTGTGGGGGAGTTCCTCTTGCGGCAAAAGCACTAGGAAGTTTCTTACGTTTTAAACGAGAAGAAAAGGAATGGCGCTATGTCAAGGAAAGCAATCTATGGAGTTTACAAGGTGAGAATTCAGTCATGTCTTCCTTGAGGTTAAGTTACTTGAATTTGCCGGTAAAATTGAGGCAGTGCTTTGCCTTTTGTGCACTTTTTTCCAAGGATCAAATTATAAGTAAGCAGTTTTTGATTGAGCTTTGGATGGCTAATGGATTTATTTCATCCAATGAAATACTGGAAGCACAAGATATCGGCAATGAGGTGTGGAATGAATTATATTGTAGATCATTTTTCCAAGATACCAAGACAAATGAATTTGGAAAAATTGTATCTTTCAAGATGCATGATCTTGTTCATGATCTTGCTCAATCTATCGCTGAAGAGATCTGTCACATCACAAATGATAGTGGCGTACCAAGTATGTCTGAAAGAGTTCGTCATCTCTCAATTTGCATGTGGGACTCTTTTGGGAAAGTTGGTTCAATCAGGTTACATAACGTTGAATCGTTAAAGACATGTATATATTATGATGACCAACTCTCACCCCATGTATTCAGATGTTATTCTTTACGAGTGCTTGAATTCAAGAGAAAAGAAAAGTTGCCGTCTTCAATTGGTCGTTTAAAATATCTAAGGTACTTGAATCTTTCTTATGGAGGTTTCAAAACTCTTCCAGAATCCTTATGTACGTTGTGGAATTTGCAGATTTTAAAGTTAGATTATTGTCAAGAACTACAAAAGTTCCCTAATAGTCTGGTACACTTGAAATCTCTACAACATCTATATTTGAGAGGCTGCTATTCACTATCAAGCTTGCCCCCGCATGTAAGGATGTTGGCATCCTTGAAAACTTTAACACTGTAA 1989 0.3937 MAEAVLEVVLDNLSSLVQKEIGLFLGFEKDFKSLSSLLTTIKATLEDAEEKQFTYKAIKDWLLKLKDAAYVLDDILDECATQALEMEYKGSKGKPSHTVQSFFVSSFHPKHVAFRYKLAKKMKRIRERLDEIAEERSKFHLTEIVRERRSGVLDWRQTTSNITQPQVFGRNEDKDQIVDFLVDDAYTCEDLSVYPVVGLGGLGKTTLAQVVFNHEKVVKHFELRIWVCVSEDFSLKRMTKGIIEAASGHACEDLDLEPLQRKLLDLLRRKRYLLVLDDVWDDGQENWQRLKSVLACGGKGASVLVTTRLPKVAAIMGTMPSHDLSMLSDTDCWELIKQRAFGPNEDERPDLVVIGKEIVKKCGGVPLAAKALGSFLRFKREEKEWRYVKESNLWSLQGENSVMSSLRLSYLNLPVKLRQCFAFCALFSKDQIISKQFLIELWMANGFISSNEILEAQDIGNEVWNELYCRSFFQDTKTNEFGKIVSFKMHDLVHDLAQSIAEEICHITNDSGVPSMSERVRHLSICMWDSFGKVGSIRLHNVESLKTCIYYDDQLSPHVFRCYSLRVLEFKRKEKLPSSIGRLKYLRYLNLSYGGFKTLPESLCTLWNLQILKLDYCQELQKFPNSLVHLKSLQHLYLRGCYSLSSLPPHVRMLASLKTLTL* 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1454 662 Gene3D - 409 500 IPR036388 -
Mtr5g1454 662 CDD RX-CC_like 2 134 IPR038005 -
Mtr5g1454 662 Pfam NB-ARC domain 172 410 IPR002182 GO:0043531
Mtr5g1454 662 PANTHER DISEASE RESISTANCE PROTEIN RP 9 661 IPR044974 GO:0006952
Mtr5g1454 662 PANTHER OS10G0130600 PROTEIN 9 661 - -
Mtr5g1454 662 Gene3D - 156 319 IPR027417 -
Mtr5g1454 662 Coils Coil 115 135 - -
Mtr5g1454 662 PRINTS Disease resistance protein signature 193 208 - -
Mtr5g1454 662 PRINTS Disease resistance protein signature 266 280 - -
Mtr5g1454 662 PRINTS Disease resistance protein signature 362 376 - -
Mtr5g1454 662 PRINTS Disease resistance protein signature 652 662 - -
Mtr5g1454 662 Gene3D Ribonuclease Inhibitor 514 662 IPR032675 -
Mtr5g1454 662 Gene3D - 5 130 - -
Mtr5g1454 662 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 154 424 IPR027417 -
Mtr5g1454 662 SUPERFAMILY L domain-like 488 662 - -
Mtr5g1454 662 Gene3D - 326 408 IPR042197 -
Mtr5g1454 662 Pfam Rx N-terminal domain 5 94 IPR041118 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1454 Mtr-Chr5 15261465 15270704 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g1454 190 654 WRKY Transcription Factor Family AT5G45050 21.375 3.94e-07 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1454 - - mtr:MTR_5g035280 1082.78