Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1453 ATGGCTGAGGCTGTCATTGAAGTTGTCCTTGATAATTTGAGCACACTCATTCAGAAGGAGCTTGGCCTATTTCTAGGTGTCGATCGTGAATTGAAAAGTCTTTCCAGCTTGCTAACTACAATCAAGGCTACACTTGAAGATGCTGAGGAGAAGCAATTCTCAAACAGAGCTATCAAGGATTGGCTGCTTAAGCTCAAAGATGCTGCTCACGTCCTCGATGACATCTTGGACGAATGTGCCACCAAAGCACTAGAACCGGAGTACAAAGGATTCAAATATGGACCATCACAAAAGGTACAAAGCTCTTGCTTATCCTCTTTAAATCCTAAGAATGTTGCTTTCCGTTACAAAATTGCTAAGAAAATTAAGAGGATAAGGGAGAGATTGGATGGAATAGCTGAAGAAAGGAGTAAGTTTCATTTGACTGAGATAGTCAGAGAAAGGAGATGTGAAGTCCTTGACTGGCGACAAACCACCTCAATTATTACTCAACCTCAAGTTTATGGAAGAGATGAAGATAAGAGTAAAATTGTAGACTTTTTGGTTGATGATGCTTCTAGTTTTGAGGATTTATCAGTTTATCCAATTGTCGGTTTAGGTGGACTTGGGAAAACAACACTTGCCCAAATTGTGTTCAATCATGAGAAGGTAGTCAACTACTTTGAGCTAAGAATTTGGGTATGCGTTTCAGAAGATTTCAGTTTGAAGAGAATGACAAAAGCCATCATAGAATCTACATCTGGTCATGCTTGTGAGGATTTAGAGCTAGAGCCGCTGCAAAGAAAACTTTTAAATTTGCTGCAAAGAAAAAGATATTTGCTGGTGTTGGATGATGTGTGGGACGACGACCAAGAGAATTGGCAGAGATTGAGATTTGTATTGGCTTGTGGAGGCAAGGGTGCTTCGATTTTAGTAACCACTCGTCTTTCAAAGGTTGCAGCAATCATGGGAACAATGCCCTTTCATGATATATCAATGCTATCTGAGACTGATTGTTGGGAATTGTTTAAACAACGAGCATTTGGACCAACTGAGGCTGAACGGTCAGATCTTGCAGTCATAGGGAAAGAGATAGTAAAAAAGTGTAGGGGAGTCCCTCTCGCAGCAAAAGCACTGGGAAGTTTATTGCGGTTTAAACGAGAAGAAAAGGAATGGCGCTATGTCAAGGAAAGTAAGCTATGGAATTTACAAGGTGAGAATTCTGTCATGCCTGCGTTGAGATTAAGTTACTTGAATTTGCCGGTAAAATTGAGACAATGTTTTGCCTTTTGTGCACTATTTCCCAAGGATGAAATTATAAGCAAACAGTTTGTAATTGAGCTTTGGATGGCTAATGGATTTATTCCATCCAATGGAATGTTGGAAGCAGAAGATATTGGTAATGAAGCATGGAATGAATTATATTGTAGATCATTTTTTCAAGATACTCAGACAGATGATTTTGGACAAATTGTATATTTCACGATGCATGATCTTGTTCATGATCTTGCTCAATCTATCACAGAAGAGGTCTGTCACATTACAAATGATAGTGGCATACCTAGTATGTCTGAAAAAATCCGCCATCTCTCAATTTGTAGGAGGGACTTTTTTCGGAATGTTTGCTCAATCAGGTTACATAATGTTGAATCGTTAAAGACATGTATAAATTATGATGACCAACTTTCACCCCATGTATTGAGATGTTATTCTTTACGAGTGCTTGACTTCGAAAGAAAAGAAAAGTTGTCGTCTTCAATTGGTCGTTTAAAATATCTAAGGTACTTGAATCTTTCTTGGGGAAATTTCAAAACTCTTCCAGAATCCTTATGTACGTTGTGGAATTTGCAGATTTTAAAGCTAGACTATTGTCAAAATCTCCAAAAGTTGCCTAATAGTCTGGTACACTTGAAAGCTCTACAACGTCTATATTTGAGAGGCTGCATTTCACTATCAAGCTTGCCCCAACATGTAAGGATGTTGGCATCCTTGAAAACTTTAACACAATACGTAGTTGGCAAGAAAAAAGGGTTTCTTTTAGCAGAATTAGGACAGATGAACCTTCAAGGAGACCTTCACATTGAGAACTTGGAGAGAGTTAAAAGTGTAATGGATGCCGCAGAAGCTAATATGTCAAGCAAGTACGTGGACAAGTTGGAATTGTCATGGGATAGAAATGAAGAATCACAATTACAGGAAAATGTTGAGGAGATTCTTGAAGTGCTTCAACCTCAAACTCAGCAACTTCGAAGTCTGGGTGTTAGAGGATATACCGGTTCCTTTTTCCCAGAATGGATGTCTAGTCCTACTCTGAAATATTTAACTAGTTTACAACTTGTGCATTGCAAAAGTTGTTTACACCTTCCGCATTTGGGGAAACTACCATCCCTAAAGAGTCTAACAGTATCTAACATGAGTCATGTAAAATACTTAGACGAGGAGTCATGCAATGATGGAATTGCAGGAGGTTTTATATGTCTTGAAAAACTGGTTCTAGTGAAGCTGCCAAACCTGATAATTTTATCAAGGGATGATAGAGAAAACATGCTCCCACACCTTTCTCAATTTCAAATTGCTGAATGTCCTAAATTGTTGGGCTTGCCTTTCCTTCCATCTCTCATTGATATGCGTATAAGCGGAAAATGCAACACGGGTTTACTAAGTTCAATTCAAAAACACGTTAATCTTGAATCCCTTATGTTCAGTGGCAATGAAGCACTAACTTGCTTTCCAGATGGGATGCTAAGAAACCTCAATTCCCTAAAAAAAATTGAAATTTATAGTCTTTCCACACTTGAAAGCTTCCCAACTGAAATCATTAACCTTAGTGCTGTCCAAGAAATACGTATTACTGAATGTGAAAATCTCAAGTCATTGACAGATGAAGTATTACAAGGGCTGCACTCTCTTAAGAGATTGAGTATTGTGAAGTACCAAAAGTTCAACCAATCTGAAAGTTTTCAATACCTCACTTGTCTTGAGGAATTGGTGATCCAAAGTTGTTCAGAAATAGAAGTTTTGCATGAGAGTTTACAACATATGACTTCCCTTCAATCGCTGACATTGTGTGATCTTCCAAATCTTGCATCCATACCTGACTGGTTAGGAAACCTAAGTTTGCTTCAAGAATTAAATATTTCTCAGTGTCCAAAGCTGACGTGCCTTCCCATGAGCATTCAATGCCTTACTGCTCTGAAACATTTGAGTATTTACAGTTGCAATAAGTTAGAGAAACGGTGTAAAGAGAAAACAGGTGAGGATTGGCCAAAAATAGCTCACATTCAATGCATTGTAGTAAAAAACATCAGAATGTTCTACGGATAA 3303 0.3824 MAEAVIEVVLDNLSTLIQKELGLFLGVDRELKSLSSLLTTIKATLEDAEEKQFSNRAIKDWLLKLKDAAHVLDDILDECATKALEPEYKGFKYGPSQKVQSSCLSSLNPKNVAFRYKIAKKIKRIRERLDGIAEERSKFHLTEIVRERRCEVLDWRQTTSIITQPQVYGRDEDKSKIVDFLVDDASSFEDLSVYPIVGLGGLGKTTLAQIVFNHEKVVNYFELRIWVCVSEDFSLKRMTKAIIESTSGHACEDLELEPLQRKLLNLLQRKRYLLVLDDVWDDDQENWQRLRFVLACGGKGASILVTTRLSKVAAIMGTMPFHDISMLSETDCWELFKQRAFGPTEAERSDLAVIGKEIVKKCRGVPLAAKALGSLLRFKREEKEWRYVKESKLWNLQGENSVMPALRLSYLNLPVKLRQCFAFCALFPKDEIISKQFVIELWMANGFIPSNGMLEAEDIGNEAWNELYCRSFFQDTQTDDFGQIVYFTMHDLVHDLAQSITEEVCHITNDSGIPSMSEKIRHLSICRRDFFRNVCSIRLHNVESLKTCINYDDQLSPHVLRCYSLRVLDFERKEKLSSSIGRLKYLRYLNLSWGNFKTLPESLCTLWNLQILKLDYCQNLQKLPNSLVHLKALQRLYLRGCISLSSLPQHVRMLASLKTLTQYVVGKKKGFLLAELGQMNLQGDLHIENLERVKSVMDAAEANMSSKYVDKLELSWDRNEESQLQENVEEILEVLQPQTQQLRSLGVRGYTGSFFPEWMSSPTLKYLTSLQLVHCKSCLHLPHLGKLPSLKSLTVSNMSHVKYLDEESCNDGIAGGFICLEKLVLVKLPNLIILSRDDRENMLPHLSQFQIAECPKLLGLPFLPSLIDMRISGKCNTGLLSSIQKHVNLESLMFSGNEALTCFPDGMLRNLNSLKKIEIYSLSTLESFPTEIINLSAVQEIRITECENLKSLTDEVLQGLHSLKRLSIVKYQKFNQSESFQYLTCLEELVIQSCSEIEVLHESLQHMTSLQSLTLCDLPNLASIPDWLGNLSLLQELNISQCPKLTCLPMSIQCLTALKHLSIYSCNKLEKRCKEKTGEDWPKIAHIQCIVVKNIRMFYG* 1101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1453 1100 CDD RX-CC_like 2 134 IPR038005 -
Mtr5g1453 1100 PANTHER DISEASE RESISTANCE PROTEIN RP 31 951 IPR044974 GO:0006952
Mtr5g1453 1100 SUPERFAMILY L domain-like 488 864 - -
Mtr5g1453 1100 Gene3D Ribonuclease Inhibitor 867 975 IPR032675 -
Mtr5g1453 1100 SUPERFAMILY L domain-like 737 1085 - -
Mtr5g1453 1100 Gene3D - 5 130 - -
Mtr5g1453 1100 Gene3D Ribonuclease Inhibitor 500 696 IPR032675 -
Mtr5g1453 1100 Gene3D Ribonuclease Inhibitor 703 866 IPR032675 -
Mtr5g1453 1100 Gene3D Ribonuclease Inhibitor 976 1088 IPR032675 -
Mtr5g1453 1100 PRINTS Disease resistance protein signature 193 208 - -
Mtr5g1453 1100 PRINTS Disease resistance protein signature 266 280 - -
Mtr5g1453 1100 PRINTS Disease resistance protein signature 362 376 - -
Mtr5g1453 1100 PRINTS Disease resistance protein signature 785 801 - -
Mtr5g1453 1100 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 154 424 IPR027417 -
Mtr5g1453 1100 Pfam Rx N-terminal domain 5 96 IPR041118 -
Mtr5g1453 1100 Coils Coil 31 51 - -
Mtr5g1453 1100 PANTHER OS05G0414200 PROTEIN 31 951 - -
Mtr5g1453 1100 Pfam NB-ARC domain 172 410 IPR002182 GO:0043531
Mtr5g1453 1100 Gene3D - 151 319 IPR027417 -
Mtr5g1453 1100 Gene3D - 326 408 IPR042197 -
Mtr5g1453 1100 Gene3D - 409 499 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1453 Mtr-Chr5 15255751 15260262 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g1453 190 649 WRKY Transcription Factor Family AT5G45050 21.739 1.93e-07 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1453 - - mtr:MTR_5g035280 2112.81