Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1440 ATGAACATGATGCCATGTTACTCCTCTTCTTCTCATTATCCAAACCACCACCGCCCCCCAATTAACGCAGAAACTATTCTCTTCAATCCCACAATGGCCGCAACTCTTTCACTCTCTTTCTCCTCTTTGGACCCACACAATCATAACCGTTTCAACATCATCACAGCCAAAACCACTCGCCGAAATTTCTCTTTCACACCCCCACTTCCCCATAACAAACCCCCCCACTTCAAACTCTTCTCCACTTCATCTTCCTCCCAATCCCAAACCCTAACCGATTCCTTCCTCAAACCAGGTAAATTCCTCACAAACACCGAACTCACCACCCTCCACCACCTCTCCACTTACCTTTACACTCACACCCTCAAATCCGGCACGGTTTGGGTTCGAGTAATGCGTGACAGCGAAGTTGACGCTATTGTTTGCTTGCTGGCGAATTCTTTCGCTGAATCGATGATGTTTCCGAAAGGGTATATTAATGTGTTGAGATTTCTTGTGAAACAGTATTTGATTGAAAGGAGGAGTTTGATGCCGCATATGGCGACGTTGATTGCGTTTTATAAAGGAAGTGGTGTTAATGGTGATGGTGAAGAAGAGGAAATGCAATTGGCTGGGACTGTTGAGATTTCTTTTAATGTTTATGGTGCTAATTCTACTCTTCCGTCGCCTGATCCGCCGAAAGATAAGCCTTATATTTGTAATATGGCTGTGGATAAATCTCTTAGAAGGAGGGGCATTGGATGGCATCTTCTAAAGGCAAGCGAGGAACTAATTTCTCGGATGAGTTCATCAGGAGAAGTGTACTTGCATTGCAGAATGATTGATGAAGCTCCATTTAACATGTATACAAAAGCTGATTACAAAATTGTAACGACAGATAGTATTTTAGTCCTGCTGTTGTTGCAGAGACGCAAACACTTGATGTGCAAGAAACTTCCTCTCATAAATATGCCTTCAGAAACAGATGTGCCATTTTCTAATGACTATGAATAA 993 0.428 MNMMPCYSSSSHYPNHHRPPINAETILFNPTMAATLSLSFSSLDPHNHNRFNIITAKTTRRNFSFTPPLPHNKPPHFKLFSTSSSSQSQTLTDSFLKPGKFLTNTELTTLHHLSTYLYTHTLKSGTVWVRVMRDSEVDAIVCLLANSFAESMMFPKGYINVLRFLVKQYLIERRSLMPHMATLIAFYKGSGVNGDGEEEEMQLAGTVEISFNVYGANSTLPSPDPPKDKPYICNMAVDKSLRRRGIGWHLLKASEELISRMSSSGEVYLHCRMIDEAPFNMYTKADYKIVTTDSILVLLLLQRRKHLMCKKLPLINMPSETDVPFSNDYE* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1440 330 Pfam Acetyltransferase (GNAT) family 201 285 IPR000182 GO:0016407
Mtr5g1440 330 Gene3D - 121 312 - -
Mtr5g1440 330 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 32 328 - -
Mtr5g1440 330 CDD NAT_SF 198 256 - -
Mtr5g1440 330 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 129 293 IPR016181 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Mtr5g1440 Acetyltransf_1 2.4e-06 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1440 - - lja:Lj2g3v1378720.1 356.681
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g1440 5 15161161 15165696 Mtr5g1440 5 15161161 15165696 ECH