Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1436 ATGGCGAGTGGAGGAGCAAGTGTAACAACAACAATGATTGCAGCTCAAATCGTTGAAGTGGGTGGTGAAACTCTAATGAAATCAGCCACTAAAGATGGAATGAGTATTTTTATTTTCATTTTTTATTCAAACCTTTTGGCTCTATGTTTTCTTCTACCATCCACTCTCTTCCACCATAGAAAAAGAGCTCCTCCTCCAATTTCAACATCAATTTTCTGTAGATTACTTCTTCTTGGTTGCCTCAAAACTGCAACTCAGACGTTAATGACTTCTGGAATTAAATTCAGTTCTCCTGCGTTGGCTTCAGCTATTGTTAATCTTGTCCCTGCTTTTACCTTCATACTTGCTATAATTTCAAGGATGGAAGTTCTAAATATGAAAAAGCATAGCAGCCAGGCAAAAGTTATTGGCACAGTGGTCTCTATTGCAGGGGCATTAGTTGTGACATTTTATAAAGGGATACCATTGATTAATGATGCCATTAAAAATATAGAAATGGGAGCAAGTGGAATTTTCCTTTTAGGGAAATCAGATTGGATAATTGGTGCTTTTCTTGTTGCAGTTGGTAGTTTTTGTCTTTCTCTTTTGTTTATTGTCCAGACTTGGATTGTCAGGGATTATCCAGAAGAGCTAGTGATAAACACCATTTGTTGCTGTTTTGTGGTAATCATATCTACCATTGTAGCTCTCATTGCAGAGGGAAATTCAAATGCTTGGAGACTCAGACCTGATAAAGAGTTGCTATCTGTGTGTTACTCAGCAACTTTTGTGGAATCATTGAAGAATGTTATACAGACATGGGCATGTCGTAAGAAAGGACCAATATATGTAGCTATGTTCAAACCTTTAAGAGTGGTCATTGCACTTAGCATGGGGGTAATATTTTTGGGAGACAATCTTTATCTTGGAAGCATGATTGGAGCTGCTATCATAGTTATTGGATTTTATGCTGTGATATGGGCAAAGGCTCAAGAGGAACACACAACAAGTGAAAATAACCTTTTGTCATCTTCTTCAGCTCCTCTGTTGTCAAACAAAAGCATAGATGTCTAG 1053 0.3761 MASGGASVTTTMIAAQIVEVGGETLMKSATKDGMSIFIFIFYSNLLALCFLLPSTLFHHRKRAPPPISTSIFCRLLLLGCLKTATQTLMTSGIKFSSPALASAIVNLVPAFTFILAIISRMEVLNMKKHSSQAKVIGTVVSIAGALVVTFYKGIPLINDAIKNIEMGASGIFLLGKSDWIIGAFLVAVGSFCLSLLFIVQTWIVRDYPEELVINTICCCFVVIISTIVALIAEGNSNAWRLRPDKELLSVCYSATFVESLKNVIQTWACRKKGPIYVAMFKPLRVVIALSMGVIFLGDNLYLGSMIGAAIIVIGFYAVIWAKAQEEHTTSENNLLSSSSAPLLSNKSIDV* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1436 350 PANTHER WAT1-RELATED PROTEIN 16 325 - -
Mtr5g1436 350 PANTHER WAT1-RELATED PROTEIN 16 325 IPR030184 GO:0016021|GO:0022857
Mtr5g1436 350 Pfam EamA-like transporter family 21 149 IPR000620 GO:0016020|GO:0016021
Mtr5g1436 350 Pfam EamA-like transporter family 181 319 IPR000620 GO:0016020|GO:0016021
Mtr5g1436 350 SUPERFAMILY Multidrug resistance efflux transporter EmrE 44 151 - -
Mtr5g1436 350 SUPERFAMILY Multidrug resistance efflux transporter EmrE 238 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1436 Mtr-Chr5 15119515 15123054 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g1436 10 340 Nodulin-like Gene Family AT3G28050 43.881 2.95e-86 263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1436 - - gmx:100793168 416.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g1436 5 15119515 15123054 Mtr5g1436 5 15119515 15123054 ECH
Mtr5g1436 5 15119515 15123054 Mtr4g3833 4 52014243 52016522 ECH