Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1410 ATGATGAACAAACCACTCAACCTTATCTGTTTCTTTTTCCTCTTCTCATCTATCACTGTTATTTCCGCCGGAGATGATGTCGCCGGAGACAAAAATCCGTTCACACCAAAAGCATTTCTGAATCGGTATTGGGACAAAGAGATCCGCAACGGTTTACCGAAACCGTCATTTCTGTTTTCCAAGGCTTCACCGCTATCCACCGTGGAAGCAGCGACGTTCGCGAAGCTAGCTTCCGGCAACGTGTTATCCACGCGCCTGCCGGAATTTTGCTCAGCCGCGAACCTACTCTGCTTGCCGGAAGTAGCCCAGAGTCTCGAAAAGCACGGAGATGATGTAAATTTCGCCATTTACAGAGACAAGAACTTCACCAACTACGGAACGGATCGACCCGGTGGATTTGACTCGTTCAAAAACTACTCCGACGGTGAAAACGTTCTGGTGAACGATTTCCGTCGCTACAGCCGAAACTCCGCCGGCCATAAAGAAACCTTCACCAGCTACGCTACCAACGCCAACGTCGCCGATCAAAGCTTCCACACTTACGGCGCCGGAGCCACCGGCGGCGGCGGCGAGTTCAAAACATACACAACTGAAACCAACGTTCCAAACGAAGTTTTCACTTCTTACTCCGATAGCGCCAACGGAAGAACACAATCCTTCAACTCTTACACAGAAAACGGTAACAGCGGTCAACAATCTTTCACTTCCTACGGTAAAAACGGTAATGGCCCCACTGAAGAATTCACCAGCTACGGAACAAGCTCCAACACTGCTGGATCGGGTTTTTCAAACTACGCCGAAACCTCAAACGCCGGTAACGACAGTTTCAAAAGTTACGGCGTAGATATGAATAACCCGACAAACAGTTTCTCTAACTATGCTAACGGTGGTAACGGTGCAACTCAAACGTTTTCAACTTACCGTGAAAAATCCAACGTTGGTGCTGATTCTTTTACTAGCTATGCAAAAACCGCAAATGCTGCGAAAATTGGTTTTGATAACTATGGAAAATCTTTCAATGATGGAACTGATACATTCACAAGCTATGCTAAAACATCAACCGGTGAAACAAAGGTTGGTTTTAAAGGCTATGGTGTTAAAAATGATTTCAAAGAGTATTCGAAGGAAGGTGTTTCTTTTGCAAAGTACACAAACGTGAGTTCGAGTTTAAGTGCTTCTGTGAAAGTGAACAAAAATGCTGCGAGTGGTAGTTTGGTAAAAAAATGGGTTGAGCCTGGTAAGTTTTTTAGAGAGAAAATGTTGAAAGAAGGTACGGTAATGCCTATGCCTGATATTAGAGATAAATTACCTAAAAGGTCGTTTTTACCCCGGAGTATTCTTGCGAAATTACCGTTTTCTACATCCAAGATTGATGAGATGAAGGGGCTATTCAAGGCTTCGGATAATGGTTCAATGGAAAAGATGATGAGGGATTCATTGGGTGATTGTGAGAGAGTTCCGGCTAAAGGTGAGACAAAAAGATGTGTTGGGTCTATTGAGGATATGATCGACTTTGCAACTTCGGTTTTGGGTCGAAATGTGGTGGTTCGGACTACTGAGAATGTAAATGGGTCGAAGAAGGATGTTATGGTGGGTCGGGTTAATGGGATTAATGGCGGGAAAGTGACCCGGTCTGTTTCGTGTCATCAGAGTTTGTTTCCGTATTTGCTTTATTATTGTCACTCGGTTCCTAAGGTTCGGGTTTATCAAGCGGAGCTACTTGACCCGAAGAGTAAAGATAAGATCAATCAAGGGGTTGCTGTTTGTCATTTGGATACTTCTGATTGGAGTCCAACTCATGGTGCTTTTATGTCTCTTGGGTCGGGTCCGGGTCGGATTGAGGTTTGTCATTGGATTTTTGAGAATGATTTGTCATGGACAGTTGCTGATTAA 1893 0.4448 MMNKPLNLICFFFLFSSITVISAGDDVAGDKNPFTPKAFLNRYWDKEIRNGLPKPSFLFSKASPLSTVEAATFAKLASGNVLSTRLPEFCSAANLLCLPEVAQSLEKHGDDVNFAIYRDKNFTNYGTDRPGGFDSFKNYSDGENVLVNDFRRYSRNSAGHKETFTSYATNANVADQSFHTYGAGATGGGGEFKTYTTETNVPNEVFTSYSDSANGRTQSFNSYTENGNSGQQSFTSYGKNGNGPTEEFTSYGTSSNTAGSGFSNYAETSNAGNDSFKSYGVDMNNPTNSFSNYANGGNGATQTFSTYREKSNVGADSFTSYAKTANAAKIGFDNYGKSFNDGTDTFTSYAKTSTGETKVGFKGYGVKNDFKEYSKEGVSFAKYTNVSSSLSASVKVNKNAASGSLVKKWVEPGKFFREKMLKEGTVMPMPDIRDKLPKRSFLPRSILAKLPFSTSKIDEMKGLFKASDNGSMEKMMRDSLGDCERVPAKGETKRCVGSIEDMIDFATSVLGRNVVVRTTENVNGSKKDVMVGRVNGINGGKVTRSVSCHQSLFPYLLYYCHSVPKVRVYQAELLDPKSKDKINQGVAVCHLDTSDWSPTHGAFMSLGSGPGRIEVCHWIFENDLSWTVAD* 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1410 630 MobiDBLite consensus disorder prediction 207 254 - -
Mtr5g1410 630 PANTHER POLYGALACTURONASE 1 BETA-LIKE PROTEIN 2 8 630 - -
Mtr5g1410 630 SMART BURP_2 413 629 IPR004873 -
Mtr5g1410 630 Pfam BURP domain 415 627 IPR004873 -
Mtr5g1410 630 PANTHER POLYGALACTURONASE 1 BETA-LIKE PROTEIN 2 8 630 - -
Mtr5g1410 630 ProSiteProfiles BURP domain profile. 415 629 IPR004873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1410 Mtr-Chr5 14775448 14778389 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1410 - - gmx:100776642 1008.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g1410 5 14775448 14778389 Mtr5g1410 5 14775448 14778389 ECH
Mtr5g1410 5 14775448 14778389 Mtr8g1966 8 29549409 29550944 PCT
Mtr8g1901 8 28758728 28760002 Mtr5g1410 5 14775448 14778389 PCT