Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1404 ATGGACTGTAATGAAATGGCTAATGAAAATAAGACAAATGGAACGTCTACTCCTTTAGAAAAAGTTTCTGAAAAAGCTTCTGCTCCGTCTCCATCAAAATTATCAACAACAAAACAGTCGGATCCTCCAGAAGAAGCACCATCAAAGTCTCCACCGCCGCCTTTAGCACCGCCGCCTCATTCTCCACCACCACCTTCACCGTCTCCTTCTCCACCACCGCCTCAAGCACAACATCCACCGCCTCAAGCGCAACATCCACCGCCTCAAGCACAACATCCACCGCCTCAAGCGCAACATCCACCGCCACATTCTTCACCACCTCCATCAAAATTTTCACCTCCACATTCTGAATCGTCGCCGCCTCCAACACCACCTTCTGAATCGTCGCCGCCTCCAACACCACCTTCTGAATCGTCGACGCCTCCAACACCACCTTCATCTCCATCATCGTCACCACCATCACCACCACCACAACCATCCGATGCTGATTCTCCTCCTTCACAATCTAATTCCCCTCCATCTCCTCAAGTTCCATCTGCACCTTCCCCCTCTTCCCAAATTAGTCCCCCACTACAAAACGATCCCTCGCTGCCTCAGTCAGCATCCATTTCCCCCAGCTCCCATTCTAAACCAAGCTTTTCTCCTTCTAATAGCGACTCTCTATCCAAATCTTCCTCCTCCCATGAAAATACAGGACAATACATTGGTTTCGCTGTCGCAGGAATTTTTGTTCTCGCCGTTATGGCAATCATTTTTGTCATCGTAATAAAAAGGAAAGACAAGCGAGGGAATTTCCATGGTATGCCACCCCCTAAGAAATCTCAAATGAAAGGAGATGTGCATTACTATGTAGAATCACCAGGTTTTGGTTATAATCATATGAACAATGGAGGTTCAATACATCCTTTGAGAAGTCCTTCAGAAGCAACACCACCACAAATGAGTGGTGGTCAAATTCTTTTTAGTTATGACCAGATTCTCGAAATTACTAATGGGTTTTCAAGTGAAAACGTGATAGGCGAAGGGGGTTTTGGGCGTGTTTACAAGGCTTTAATGCCCGATGGTAGAGTCGGAGCACTTAAGTTGTTGAAGGCCGGTAGTGGTCAAGGAGAGAGGGAATTCAGAGCAGAGGTTGATACTATTAGTCGTGTTCATCATCGACATTTGGTATCGTTGATTGGCTATTGTATAGCTGAGCAACAAAGAGTCCTCATTTATGAGTTTGTTCCTAATGGGAATCTTGATCAACATTTGCATGAAAGTCAATGGAATGTTTTGGATTGGCCCAAGAGGATGAAGATAGCAATTGGTGCTGCAAGGGGTCTAGCATATCTGCACGAAGGCTGCAACCCAAAGATTATTCACAGAGATATTAAATCTTCGAATATACTTTTGGATGATTCTTATGAGGCACAAGTTGCAGACTTTGGACTTGCCAGACTAACCGACGATACAAATACTCATGTATCCACTAGGGTAATGGGTACATTTGGCTATATGGCTCCAGAGTATGCAACAAGTGGAAAACTAACGGATAGATCAGATGTTTTCTCATTTGGAGTTGTTCTTCTTGAACTTGTTACTGGAAGGAAACCTGTTGATCCAACCCAGCCTGTGGGAGATGAGAGTTTGGTTGAGTGGGCTCGTCCAATTCTCCTTCGTGCAATCGAGACAGGTGACTTTAGTGAACTAGCAGACCCAAGGCTTCACCGACAATATATTGACAGTGAAATGTTTAGAATGATTGAGGCAGCTGCAGCATGTATTCGCCATTCTGCCCCAAAACGACCCCGTATGGTTCAGATTGCAAGGGCCTTGGACAGTGGAGATCAACTATATGATCTATCAAATGGGGTGAAATTTGGTCAGAGCACAATTTATGATTCTGGGCAATATAATGAAGACATTATGAGATTCAAAAGGATGGCTAATGGAAGTTTTGCTGACTCTGAATTTGATATGTACAGCTCAGAATACAGTTCAAGAGAAACGTCTGGATCTGCCCTTGTGCCAAAATCTTGA 2022 0.4461 MDCNEMANENKTNGTSTPLEKVSEKASAPSPSKLSTTKQSDPPEEAPSKSPPPPLAPPPHSPPPPSPSPSPPPPQAQHPPPQAQHPPPQAQHPPPQAQHPPPHSSPPPSKFSPPHSESSPPPTPPSESSPPPTPPSESSTPPTPPSSPSSSPPSPPPQPSDADSPPSQSNSPPSPQVPSAPSPSSQISPPLQNDPSLPQSASISPSSHSKPSFSPSNSDSLSKSSSSHENTGQYIGFAVAGIFVLAVMAIIFVIVIKRKDKRGNFHGMPPPKKSQMKGDVHYYVESPGFGYNHMNNGGSIHPLRSPSEATPPQMSGGQILFSYDQILEITNGFSSENVIGEGGFGRVYKALMPDGRVGALKLLKAGSGQGEREFRAEVDTISRVHHRHLVSLIGYCIAEQQRVLIYEFVPNGNLDQHLHESQWNVLDWPKRMKIAIGAARGLAYLHEGCNPKIIHRDIKSSNILLDDSYEAQVADFGLARLTDDTNTHVSTRVMGTFGYMAPEYATSGKLTDRSDVFSFGVVLLELVTGRKPVDPTQPVGDESLVEWARPILLRAIETGDFSELADPRLHRQYIDSEMFRMIEAAAACIRHSAPKRPRMVQIARALDSGDQLYDLSNGVKFGQSTIYDSGQYNEDIMRFKRMANGSFADSEFDMYSSEYSSRETSGSALVPKS* 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1404 673 Gene3D Transferase(Phosphotransferase) domain 1 409 619 - -
Mtr5g1404 673 SUPERFAMILY Protein kinase-like (PK-like) 310 606 IPR011009 -
Mtr5g1404 673 Pfam Protein tyrosine and serine/threonine kinase 336 604 IPR001245 GO:0004672|GO:0006468
Mtr5g1404 673 SMART serkin_6 333 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g1404 673 ProSitePatterns Serine/Threonine protein kinases active-site signature. 453 465 IPR008271 GO:0004672|GO:0006468
Mtr5g1404 673 ProSiteProfiles Protein kinase domain profile. 333 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g1404 673 MobiDBLite consensus disorder prediction 45 185 - -
Mtr5g1404 673 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 84 668 - -
Mtr5g1404 673 Gene3D Phosphorylase Kinase; domain 1 300 408 - -
Mtr5g1404 673 MobiDBLite consensus disorder prediction 1 229 - -
Mtr5g1404 673 MobiDBLite consensus disorder prediction 186 229 - -
Mtr5g1404 673 PANTHER RECEPTOR-LIKE KINASE 84 668 - -
Mtr5g1404 673 CDD STKc_IRAK 339 607 - -
Mtr5g1404 673 MobiDBLite consensus disorder prediction 1 44 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1404 Mtr-Chr5 14707514 14715218 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g1404 236 664 Trihelix Transcription Factor Family AT1G70460 59.111 0.0 552
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Mtr5g1404 PK_Tyr_Ser-Thr 1.1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1404 - - mtr:MTR_5g034210 795.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g1404 5 14707514 14715218 Mtr5g1404 5 14707514 14715218 ECH