Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1381 ATGAAGAAACCAGTCCCTCTCATATTTTCTCAATGCCTCAAACTACTTCTAATCAAGTTTGTACTACTATCAGAAACTATAATAGCAGAACCAAGAGCAAAGACAGTTATGATAACATGTGGCCATCAAGTAGAGCATAACACAAGCATCTTTGTTCCGAATTTTGTTGCAACTATGGAGAAGATTAGCGAGCAGATGCGCAGTACCGGCTTCGGCACAGCAGTTACAGGGACAGGACCTGATGATAACTATGGCCTAGCACAATGCTATGGATATCTTTCATTACTTGACTGTGTGTTGTGTTATGCTGAGGCGCGCACGGTTCTTCCTCAGTGCTTCCCTTATAACTCCGGTCGCATTTACCTTGATGGTTGCTTCATGAGGTCTGTGAACTATAGTTTTTTTAGTGAGTATACAGGAAAAGAAGATAGAACTGTGTGTGGGAACACAACTAAGAAGAGCTCGGGTTTTCAAGCAGCAGCGAAGGAGGCAGTGTTAAGAGCGGTTCGAGATGCACCGAAAAATAAAGGCTATGCCAGAGGGAAAGTAGTTGTATCAGGAACATCGAATGAATCTGCTTATGTTCTGGCTGATTGTTGGAGAAGTTTGGATTCTAAGTCTTGCAAAGCATGTCTCGAGCATGCGTCATCTTCTATTTTGAGATGTCTGCCCTCGTCAGAAGGACGGGCGCTCAACACCGGATGCTTCATGAGGTACTCCAACACTGACTTTCTTAACAAGGAAGTTGAAAATGGGAGTTCAGGAGGTAATGTAGTAGTGATAGTCGTTGCAGTAGTTAGTTCGGTGATCGTTGTGGTGGTTGCCGTAACTTTTGGAGCTTATATCTGGAAACAGAGATACATTCAAAAGAAAAGAAGAGGATCAAATGATGCAGAAAAGTTAGCAAAGAGTCTAGAGCAAAAAAGCTTGAACTTCAAGTACAATACATTGGAAAAAGCTACTGGATCTTTTAATGACAATAGAAAAATAGGGCATGGAGGATTCGGAACGGTTTATAAAGGAGTTCTACCAGATGGAAGAGAGATTGCTATCAAGAGGTTATTTTTCAACAACAGACATAGAGCAGCAGATTTCTCTAACGAAGTCGACATAATTAGCGGTGTCGAACACAAGAATCTAGTTAGACTATTAGGATGCAGTTGTTCAGGACCCGAAAGCCTTCTTGTATATGAATTTATGCCTAACAGAAGTCTTGATCGCTTCATTTTTGATAAAAACAAGGGCAGAGAACTAAACTGGGAAAAAAGATATGAAATTATTATTGGGACAGCTGAAGGATTAGTTTACCTGCATGAGAACTCCAAAATCAGAATAATTCATAGAGATATAAAAGCCAGCAACATCCTATTGGATTCAAAGCTTCGAGCTAAAATTGCAGATTTTGGTTTGGCCAGGTCCTTTCAAGAAGACAAGAGCCACATAAGCACAGCTATTGCAGGAACTTTGGGTTATATGGCTCCAGAGTATCTAGCTCATGGTCAGTTAACAGAAAAGGCAGACGTATATAGTTTCGGAGTATTACTGCTAGAGATAGTTACTGGAAGACAGAACAACAGGAGCAAAGCATCAGAATATTCAGACAGTTTAGTTATAGTGACATGGAAGCATTTTCAGTCGAGGACTGCTGAACAGTTGTTCGATCCAAATATAGAGTTGCACAACGACAGTAATAGTGATGTTAAGAATGAGAGTTTGAGAGTGGTTCACATAGGACTTCCATGCATCCAAGAGGTCGCTTCATTGCGACCAACTATGTCAAAGGCGTTACAGATGCTAACCAAGAATGAGGAGCATCTTGTTGCTCCCTCTAATCCACCTTTCTTAGATGAGAGTACCATGGAACTCCATGACACAAGTGGCGACCCATTTTACCTCCACAAAACAGCTGATTCAGTTGCTACTATGTCAAATAGCTCTTTCTATGGAAACGCAGAGAAAATAAATCACTGCACACATTAA 1980 0.4096 MKKPVPLIFSQCLKLLLIKFVLLSETIIAEPRAKTVMITCGHQVEHNTSIFVPNFVATMEKISEQMRSTGFGTAVTGTGPDDNYGLAQCYGYLSLLDCVLCYAEARTVLPQCFPYNSGRIYLDGCFMRSVNYSFFSEYTGKEDRTVCGNTTKKSSGFQAAAKEAVLRAVRDAPKNKGYARGKVVVSGTSNESAYVLADCWRSLDSKSCKACLEHASSSILRCLPSSEGRALNTGCFMRYSNTDFLNKEVENGSSGGNVVVIVVAVVSSVIVVVVAVTFGAYIWKQRYIQKKRRGSNDAEKLAKSLEQKSLNFKYNTLEKATGSFNDNRKIGHGGFGTVYKGVLPDGREIAIKRLFFNNRHRAADFSNEVDIISGVEHKNLVRLLGCSCSGPESLLVYEFMPNRSLDRFIFDKNKGRELNWEKRYEIIIGTAEGLVYLHENSKIRIIHRDIKASNILLDSKLRAKIADFGLARSFQEDKSHISTAIAGTLGYMAPEYLAHGQLTEKADVYSFGVLLLEIVTGRQNNRSKASEYSDSLVIVTWKHFQSRTAEQLFDPNIELHNDSNSDVKNESLRVVHIGLPCIQEVASLRPTMSKALQMLTKNEEHLVAPSNPPFLDESTMELHDTSGDPFYLHKTADSVATMSNSSFYGNAEKINHCTH* 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1381 659 ProSiteProfiles Gnk2-homologous domain profile. 139 244 IPR002902 -
Mtr5g1381 659 CDD STKc_IRAK 330 601 - -
Mtr5g1381 659 Gene3D Phosphorylase Kinase; domain 1 284 399 - -
Mtr5g1381 659 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 2 9 631 - -
Mtr5g1381 659 Pfam Salt stress response/antifungal 150 241 IPR002902 -
Mtr5g1381 659 Pfam Salt stress response/antifungal 47 130 IPR002902 -
Mtr5g1381 659 SMART serkin_6 324 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g1381 659 ProSiteProfiles Gnk2-homologous domain profile. 33 134 IPR002902 -
Mtr5g1381 659 Coils Coil 288 308 - -
Mtr5g1381 659 Pfam Protein kinase domain 324 597 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g1381 659 ProSiteProfiles Protein kinase domain profile. 324 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g1381 659 Gene3D - 33 134 IPR038408 -
Mtr5g1381 659 Gene3D - 143 244 IPR038408 -
Mtr5g1381 659 SUPERFAMILY Protein kinase-like (PK-like) 307 623 IPR011009 -
Mtr5g1381 659 ProSitePatterns Serine/Threonine protein kinases active-site signature. 445 457 IPR008271 GO:0004672|GO:0006468
Mtr5g1381 659 Gene3D Transferase(Phosphotransferase) domain 1 400 610 - -
Mtr5g1381 659 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 9 631 - -
Mtr5g1381 659 ProSitePatterns Protein kinases ATP-binding region signature. 330 352 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1381 Mtr-Chr5 14437860 14441388 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g1381 2 649 Receptor kinase-like Gene Family AT1G70520 64.165 0.0 822
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mtr5g1381 Pkinase 6.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1381 - - gmx:100305420 1037.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g1381 5 14437860 14441388 Mtr5g1381 5 14437860 14441388 ECH