Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1372 ATGGCTTCTCTAATTCAACTTCTTTCAATTTTTCTACCTCTTCTAGCATCTTCATTACCAACTATATTTTCTATTGAAGTTTCAATGAAAAAAGCTTACATGGAGCCTTATAAATGTTCTACAAAGATGAGAACATGCAATGCATCACTCTACCATATAAACTACAATCACAACATAGAACAAATAGCTAATTTTTATTCTATTGATCCTTCACAAATCAAACCAATAATTCGTAGCACAAAACAAGATTACCTAGTAAAAGTGCCTTGTTCTTGCAAAAACATCAAAGATCTTAGTGGATATTTTTATGAAACAACCTACAAAGTGAGTCCTAATGAAACTTCTGTGGATATTATGAATCTTATTTATAGTGGTCAAGCTTGGCAAGTTAACGAAGATTTGGTTGCAAATGAGAATGTAACAATACATATTCCTTGTGGATGTTCAGAATTTGAGTCACAAATTGTTGTTACATATACTGTTCAGCAAAGTGATACACCAACATCAATTTCTCTTTTGCTAAATGCTACTATTGATGGCATGGTGAGAATTAACCAAATTTTGGGTCCTAACCCAACATTCATAGATATTGGTTGGGTGTTATATGTTCCTAAGGAATTAAAAGGGTCACCACTTTACCATGGAAAAGAAAAGAAACACAAGTGGGTGATAATTATTGGTATCTTAGTGAGTGTGACATTGCTTTCCGTAATTACCTTGATCATTTTCATTCTAAGGAGAAATAAAGCCTATGAAACCAGCAAATATGATCCAAAAACTGTCTCTAAAAGATCATTTGGCAATAGAACTATTTCCTTAAGGAATCATGAGTTTCATAAAGAATATATGGAAGATGCAACACAATTTGATTCAGAAAGACCAGTAATTTATGATTTTGAGGAGATTGAACATGCTACAAATAACTTTGATGAAACTAGAAGGATTGGAGTTGGTGGATATGGTACTGTCTATTTTGGAATGCTGGAGGAGAAGGAGGTTGCTGTGAAGAAAATGAAGTCTAACAAATCCAAAGAGTTCTATGCAGAACTCAAAGCCTTATGCAAAATCCATCATATCAATATTGTGGAGTTGTTAGGATATGCTAGTGGAGATGATCACCTTTATTTGGTGTATGAGTATGTTCCTAATGGATCTCTAAGTGAGCACCTTCATGATCCTCTATTGAAAGGTCACCAGCCTCTTTCTTGGTGTGCAAGAACTCAAATTGCACTTGATTCAGCAAAAGGTATTGAATACATACATGATTACACGAAAGCGCGATATGTGCACCGTGATATAAAGACTAGTAATATTCTTCTTGATGAGAAGCTACGAGCCAAGGTAGCCGATTTCGGACTTGCAAAGCTAGTCGAAAGAACCAATGATGAAGAATTTTTAGCAACAAGACTTGTTGGAACACCAGGCTACCTTCCACCAGAATCTGTGAAGGAGCTACAAGTGACAATAAAAACTGATGTATTTGCATTTGGAGTGGTTATATCTGAGTTGATAACAGGGAAACGTGCATTATTTCGTGACAACAAAGAAGCTAATAATATGAAATCACTTATTGCAGTTGTTAACAAAATATTTCAAGATGAGGACCCAGTAGCTGCTTTGGAAGCTGTTGTAGATGGAAATCTTCTACGTAATTATCCTATAGAAGGTGTCTACAAGATGGCAGAATTATCACATTGGTGTTTGAGTGAAGAACCAGTGGACAGGCCTGAAATGAAAGAGATCGTTGTGGCAGTGTCAAAGATTGTAATGTCCTCAATAGAATGGGAAGCATCACTAGGTGGGGACAGTCAGGTTTTCAGCGGTGTATTTGATGGAAGATAA 1842 0.3572 MASLIQLLSIFLPLLASSLPTIFSIEVSMKKAYMEPYKCSTKMRTCNASLYHINYNHNIEQIANFYSIDPSQIKPIIRSTKQDYLVKVPCSCKNIKDLSGYFYETTYKVSPNETSVDIMNLIYSGQAWQVNEDLVANENVTIHIPCGCSEFESQIVVTYTVQQSDTPTSISLLLNATIDGMVRINQILGPNPTFIDIGWVLYVPKELKGSPLYHGKEKKHKWVIIIGILVSVTLLSVITLIIFILRRNKAYETSKYDPKTVSKRSFGNRTISLRNHEFHKEYMEDATQFDSERPVIYDFEEIEHATNNFDETRRIGVGGYGTVYFGMLEEKEVAVKKMKSNKSKEFYAELKALCKIHHINIVELLGYASGDDHLYLVYEYVPNGSLSEHLHDPLLKGHQPLSWCARTQIALDSAKGIEYIHDYTKARYVHRDIKTSNILLDEKLRAKVADFGLAKLVERTNDEEFLATRLVGTPGYLPPESVKELQVTIKTDVFAFGVVISELITGKRALFRDNKEANNMKSLIAVVNKIFQDEDPVAALEAVVDGNLLRNYPIEGVYKMAELSHWCLSEEPVDRPEMKEIVVAVSKIVMSSIEWEASLGGDSQVFSGVFDGR* 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1372 613 PANTHER LYSM-DOMAIN PROTEIN KINASE FAMILY PROTEIN-RELATED 21 613 - -
Mtr5g1372 613 SUPERFAMILY LysM domain 157 204 IPR036779 -
Mtr5g1372 613 Pfam Protein kinase domain 310 582 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g1372 613 Gene3D Transferase(Phosphotransferase) domain 1 381 598 - -
Mtr5g1372 613 SUPERFAMILY Protein kinase-like (PK-like) 293 583 IPR011009 -
Mtr5g1372 613 SMART serkin_6 309 589 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g1372 613 ProSitePatterns Serine/Threonine protein kinases active-site signature. 428 440 IPR008271 GO:0004672|GO:0006468
Mtr5g1372 613 Gene3D Phosphorylase Kinase; domain 1 287 380 - -
Mtr5g1372 613 Gene3D LysM domain 152 209 IPR036779 -
Mtr5g1372 613 ProSitePatterns Protein kinases ATP-binding region signature. 315 337 IPR017441 GO:0005524
Mtr5g1372 613 ProSiteProfiles Protein kinase domain profile. 309 589 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g1372 613 ProSiteProfiles LysM domain profile. 157 203 IPR018392 -
Mtr5g1372 613 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 21 613 IPR044812 GO:0019199|GO:0045087
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1372 Mtr-Chr5 14330526 14334706 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g1372 289 613 Receptor kinase-like Gene Family AT1G51940 51.360 9.33e-118 362
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Mtr5g1372 Pkinase 8.6e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1372 - - gmx:100800907 906.746