Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1368 ATGAACCTTGATACTGTTTTTCTTCCAAAACCAATTTTTCTTCATGGGTTATCTAGCATACTTCATATACTATTGCTTGTGGCGGTTTTAATCTCATGGGTTTGGAAAAAAATCACAACTTGTGTTGTCAATGAGTTTAAGGAGACACCTAATAGCACAAAATTATGTTCCATTGGTTTCTCTTTTTTCAATTTTGTTCTGTTTCTGTTCAATTATTTTTACTGGTATACAAGTGATTGGTCAGAAGAAAAAGCTGTTACCCTTTTTGATTTAGCTCTCAAAACAGTTACTTGGTTCGTTCTTTTTGTTTGTTTCCAGAAAGGGTTCTTGTTTTTCTTCAGTTTAGGTCAAAGAAAAAGAAAGTTTTCATTCTTCTTTAGAGCTTGGTGTGTTTTCTATCTTTTTGTTTCATGTTATTGTTTTGTGGTTGACATTGTTGTTCTTTATCAAAATCACATTGAGTTAACGGTTCACTGCATGATTTCTGATGTTGTATCATTTTGTGTTGGTTTGTTCTTTTGTTATGTGGGGTATTGTGTGAAACTTGAGAGTGAAGAAAGTGATAGAACTATTCATGAGCCTCTTTTGAATGGTGATACACATGTTGGTAATGGTAATGGTTTAGAGTTACAAGCGACTAAAGGGAGTGACACTGTTGCTCCTTTTTCAAATGCTGGATTTTGGAGTCTTCTCACCTTCACTTGGGTGAGTCCACTTATAGCATTTGGCAATAAGAAGACGTTAGACCTTGAGGATGTTCCTCAGCTAGATAGTAGAGATAGTGTGGTTGGAGCTTTTCCTATTTTCAGAGACAAACTTGAAGCTGATTGTGGTGCAATCAATAGAGTAACCACACTTAAATTGGTTAAGTCTTTGATAATCTCAGGGAAAAAAGAGATTTTTATCACTGCTTCTCTTGCATTGGTAAACACTTTTTCTACTTATGTTGGCCCTTATCTTATTGATTCTTTTGTTCAATACCTTGATGGAAAAAGGCTATATGAGAATCAAGGCTATGTGTTGGTTTCTTCCTTTTTCTTTGCAAAGCTTGTAGAAAGCTTAACAAACAGGCAGCAGTTCTTTAGGTTGCAGCAACTCGGACTTCGAATCCAAGCACTGCTTGTGACATTGATATATAACAAAGCCTTAACACTTTCATCTCAATCAAGGCAGTGTCACACTTCTGGAGAAATAATCAATTTCATGACCGTTGATGCTGAAACAGTTGGTAGTTTCAGTTGGTATATGCATGATTTGTGGATAGTAGCTTTGCAAGTTACATTGGCATTGTTGATTTTGTATAAAAACCTTGGACTTGCTTCAGTTGCTGCTTTTGTTACAACCATCATTGTTATGTTGGCAACTCTTCCAACGGGATCATTCCAAGAGAAGTTACATAATAAGTTGATGGAGTCAAAGGATACTAGAATGAAGACCACATCTGAAATTTTAAGAAACATGAGGATCCTCAAACTACAAGGATGGGAAATGAAGTTTCTGTCTAAAATAACTGAGCTCAGAGACGCCGAACAGGGGTGGTTGAAAAAGTATCTTTATACTTCCGCTGTGACTACGTTTGTCCTTTGGGGTACACCAATTCTTGTATCTGTGGTTACTTTTGGTACTTGTACGCTCATAGGGATCCCACTTGAGTCAGGAAAGGTTCTGTCGGCACTTGCAACATTCAGGATGCTTCAAAGGCCTATTTATAGTCTTCCAGATGTAATTTCAATGATAGCACAAACTAAAGTTTCTCTTGATAGGATCGGGTCGTTCCTTCGTCTTGATGACTTGCAGTCTGATGTTGTCAAAAAGCTTCCTCCGGGTAGTTCTGATACTGCAATTGAAGTGGTTAATGGGAATTTTTCTTGTGATTTATCTTCACCCAATCCAACTTTGCAGAACGTAAACCTCAAAGTTTTTCATGGCATGAAGGTTGCTGTTTGTGGTACTGTTGGATCAGGCAAGTCTACTTTACTTTCATGTGTATTGGGAGAAGTACCAAAGATATCAGGCATCCTTAAAGTTTGTGGAACAAAGGCCTATGTTGCTCAATCACCATGGATTCAAAGTGGCACGATAGAGGATAATATATTGTTTGGTGAACACATGGTTAAGGAAAGGTATGAGATGGTACTTGAAGCATGTTCCCTGAAGAAGGATCTGGAAATATTGTCATTTGGTGATCAGACAGTTATAGGCGAGCGTGGAATAAATTTGAGTGGTGGACAGAAACAGAGAATACAAATTGCTCGCGCTCTTTACCAAGATGCTGATATATATCTATTTGATGATCCTTTTAGTGCCGTGGATGCTCATACAGGATCTCACCTTTTTAAGGAATGCTTGCTGAGTGTTCTAAGTTCAAAAACAGTTGTTTATGTTACTCATCAAGTGGAGTTCTTACCTACTGCTGACCTTATATTGGTCATAAAAGATGGAAAAATTACTCAAAGCGGAAAGTATGCCAGCCTTCTTGACATTGGAACCGATTTTATGGAAGTTGTTGGTGCACACAGAGAAGCTTTGTCTGCACTTGAATCATTGGATGGAGGAAAAACATCTAATGAGATAAGTACATTCGAACAAGAAGTAAGTATCTCTGGCACTCATGAAGAGGCAACCAAAGATGTGCAAAATGGTAAAGCAGATGATAATAGCGAACCGAAAAACCAACTTGTTCAAGAAGAAGAAAGGGAGAAAGGTAAAGTTGGGTTTTCGGTGTATTGGAAGTATATCACAACTGCATATGGAGGATCTGTCGTACCATTCATATTATTGGCCTATATTCTTTTTCAAGCTCTTCAAATTGGAAGCAACTACTGGATGGCGTGGGCAACTCCCATCTCAGCAGATGTGGAGCCACCTGTTGAAGGGACGACTCTTATTGAAGTCTATGTTGGTTTGGCCTTTGCAAGTTCTATATGCATTCTTGTTAGATCTATGTTACTTGTTACAGTTGGTTGTAAGACAGCTACTATACTCTTCAAAAAAATGCACTTGTGTATCTTTCGCGCCCCCATGTCATTTTTCGATTCTACTCCAAGTGGACGGATCCTTAATAGAGCTTCTACTGACCAAAGAGCAGTGGATACAGACATTCCTGATAAAATTGGCACATTTGCCTTTTCTATGATCCAGCTTCTGGGAATTATAGCAGTTATGTCTCAGGTTGCATGGCAAGTTTTCATCGTATTTTTACCCATGATAGCAGTCAGCATTTGGTATCAGCGATATTATTTACCATCAGCCCGTGAACTGTCACGTTTAGGTGGAGTATGCAAAGCCCCAATCATTCAACACTTTGCGGAAACAATTTCCGGCACTTTAACCATTAGAAGCTTTGATAAACAGTCAAGATTTCATGAAACAAATATGAAACTGATTGATGGGTATTCTCGGCCAAAGTTCAACATTGCTGCTGCTATGGAATGGTTATGTTTCCGTTTAGATATGTTGTCTTTGATCACATTTGCCTTTTCTTTGATATTCTTGATATCGATTCCACCTGGAATCATAAATCCAGGCATTGCTGGTCTAGCTGTTACCTATGGTCTAAATTTAAACATAATACAAGCTTGGATGATATTGACACTTTGCAACTTGGAGAACAAAATTATATCGGTAGAAAGGATGCTTCAGTATACAACCATTCCAAGTGAGCCTCCCCTTGTTTTAGAAGAAGAAAATAGGCCAATCCCTTCTTGGCCCGCATATGGCGAGGTTGATATACGGAACTTGCAGGTTCGGTACGCTCCACATCTTCCGCTTGTGTTGCATGGCCTGACATGCACATTTCGTGGAGGATTGAAAACCGGCATTGTTGGTAGAACAGGTAGCGGCAAATCAACTCTTGTACAAGCACTTTTTCGACTCGTTGAACCTTCTGCTGGGGAACTTATCATTGACAACATCAACATCTATACAATCGGACTGCATGATCTGAGGTCTAGACTAAGCATTATCCCGCAAGACCCAACAATGTTTGAGGGGACAGTGAGAAGTAATCTGGACCCCCTTGAAGAGTACACTGATGAACAAATATGGGAGGCCTTGGATAAGTGTCAACTGGGAGATGAAGTTAGAAAGAATGAAGGAAAGCTTGACTCTTCAGTTAGTGAGAATGGTGAGAATTGGAGCATGGGTCAGAGGCAGTTGGTTTGCCTTGGTAGGGTTCTACTTAAGAAGAGCAAGATTTTGGTCCTTGATGAAGCAACTGCATCAGTTGATACAGCTACAGATAATTTGATTCAGCAAACTCTTAGGAAGCATTTCACTGACTCCACGGTCATTACCATTGCGCATCGAATAACTTCTGTTCTTGACAGTGACATGGTTCTACTTCTTAGTCAAGGACTTGTTGAGGAGTATGACTCCCCAACCACATTGCTAGAGGATAAGTCATCATCTTTTGCTAAGCTTGTTGCAGAGTATACCTCGAGGTCCAACTCCAACTTTTGA 4461 0.3923 MNLDTVFLPKPIFLHGLSSILHILLLVAVLISWVWKKITTCVVNEFKETPNSTKLCSIGFSFFNFVLFLFNYFYWYTSDWSEEKAVTLFDLALKTVTWFVLFVCFQKGFLFFFSLGQRKRKFSFFFRAWCVFYLFVSCYCFVVDIVVLYQNHIELTVHCMISDVVSFCVGLFFCYVGYCVKLESEESDRTIHEPLLNGDTHVGNGNGLELQATKGSDTVAPFSNAGFWSLLTFTWVSPLIAFGNKKTLDLEDVPQLDSRDSVVGAFPIFRDKLEADCGAINRVTTLKLVKSLIISGKKEIFITASLALVNTFSTYVGPYLIDSFVQYLDGKRLYENQGYVLVSSFFFAKLVESLTNRQQFFRLQQLGLRIQALLVTLIYNKALTLSSQSRQCHTSGEIINFMTVDAETVGSFSWYMHDLWIVALQVTLALLILYKNLGLASVAAFVTTIIVMLATLPTGSFQEKLHNKLMESKDTRMKTTSEILRNMRILKLQGWEMKFLSKITELRDAEQGWLKKYLYTSAVTTFVLWGTPILVSVVTFGTCTLIGIPLESGKVLSALATFRMLQRPIYSLPDVISMIAQTKVSLDRIGSFLRLDDLQSDVVKKLPPGSSDTAIEVVNGNFSCDLSSPNPTLQNVNLKVFHGMKVAVCGTVGSGKSTLLSCVLGEVPKISGILKVCGTKAYVAQSPWIQSGTIEDNILFGEHMVKERYEMVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKECLLSVLSSKTVVYVTHQVEFLPTADLILVIKDGKITQSGKYASLLDIGTDFMEVVGAHREALSALESLDGGKTSNEISTFEQEVSISGTHEEATKDVQNGKADDNSEPKNQLVQEEEREKGKVGFSVYWKYITTAYGGSVVPFILLAYILFQALQIGSNYWMAWATPISADVEPPVEGTTLIEVYVGLAFASSICILVRSMLLVTVGCKTATILFKKMHLCIFRAPMSFFDSTPSGRILNRASTDQRAVDTDIPDKIGTFAFSMIQLLGIIAVMSQVAWQVFIVFLPMIAVSIWYQRYYLPSARELSRLGGVCKAPIIQHFAETISGTLTIRSFDKQSRFHETNMKLIDGYSRPKFNIAAAMEWLCFRLDMLSLITFAFSLIFLISIPPGIINPGIAGLAVTYGLNLNIIQAWMILTLCNLENKIISVERMLQYTTIPSEPPLVLEEENRPIPSWPAYGEVDIRNLQVRYAPHLPLVLHGLTCTFRGGLKTGIVGRTGSGKSTLVQALFRLVEPSAGELIIDNINIYTIGLHDLRSRLSIIPQDPTMFEGTVRSNLDPLEEYTDEQIWEALDKCQLGDEVRKNEGKLDSSVSENGENWSMGQRQLVCLGRVLLKKSKILVLDEATASVDTATDNLIQQTLRKHFTDSTVITIAHRITSVLDSDMVLLLSQGLVEEYDSPTTLLEDKSSSFAKLVAEYTSRSNSNF* 1487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1368 1486 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 301 581 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr5g1368 1486 SMART AAA_5 642 815 IPR003593 -
Mtr5g1368 1486 SMART AAA_5 1268 1460 IPR003593 -
Mtr5g1368 1486 SUPERFAMILY ABC transporter transmembrane region 923 1223 IPR036640 GO:0005524|GO:0016021
Mtr5g1368 1486 MobiDBLite consensus disorder prediction 869 898 - -
Mtr5g1368 1486 Pfam ABC transporter 1259 1407 IPR003439 GO:0005524
Mtr5g1368 1486 Pfam ABC transporter 633 767 IPR003439 GO:0005524
Mtr5g1368 1486 MobiDBLite consensus disorder prediction 866 898 - -
Mtr5g1368 1486 Gene3D - 1225 1478 IPR027417 -
Mtr5g1368 1486 PANTHER MULTIDRUG RESISTANCE PROTEIN ABC TRANSPORTER FAMILY PROTEIN 89 1486 - -
Mtr5g1368 1486 CDD ABCC_MRP_domain1 615 815 - -
Mtr5g1368 1486 SUPERFAMILY ABC transporter transmembrane region 293 594 IPR036640 GO:0005524|GO:0016021
Mtr5g1368 1486 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 89 1486 - -
Mtr5g1368 1486 CDD ABC_6TM_ABCC_D2 922 1216 IPR044726 GO:0140359
Mtr5g1368 1486 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1244 1476 IPR003439 GO:0005524
Mtr5g1368 1486 Gene3D - 598 850 IPR027417 -
Mtr5g1368 1486 Gene3D ABC transporter type 1, transmembrane domain 281 597 IPR036640 GO:0005524|GO:0016021
Mtr5g1368 1486 Gene3D ABC transporter type 1, transmembrane domain 884 1222 IPR036640 GO:0005524|GO:0016021
Mtr5g1368 1486 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 615 838 IPR003439 GO:0005524
Mtr5g1368 1486 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1231 1468 IPR027417 -
Mtr5g1368 1486 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 613 836 IPR027417 -
Mtr5g1368 1486 Pfam ABC transporter transmembrane region 301 568 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr5g1368 1486 Pfam ABC transporter transmembrane region 924 1166 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr5g1368 1486 CDD ABC_6TM_ABCC_D1 302 589 IPR044746 GO:0140359
Mtr5g1368 1486 ProSitePatterns ABC transporters family signature. 740 754 IPR017871 GO:0005524
Mtr5g1368 1486 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 924 1204 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr5g1368 1486 CDD ABCC_MRP_domain2 1240 1460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1368 Mtr-Chr5 14280941 14289917 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g1368 625 826 Calmodulin-binding Proteins AT2G36910 34.389 7.72e-24 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1368 - K05666 gmx:100777836 2313.88