Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mtr5g1355 | ATGCCTCCACTACTCACAAACACACATCACTATCATTACTTACTTCCTCCTTCAACCTCTCACAACCGCCATCACCACCGTCACCGCCACTGCCACCAACCTCTTATCACATTCTCCTCCGTCAACCGCCACCATTTCACCCTCTCTTCTTCCAAACGCATTCTCTTATCCTCTTCAATAAAATCATCTTCCATCAATGAAGTTTCAATCCACAACAATTCAGAATCAGCTTCCAATGCTTCTGACGAGTTTCTTGACAGAATACGCAAATTGGTTTCTTTCCTTCCTTCTATTTTCCCTGGAGGAACATGGTGGAACTTCTCCGATGATGTCGAGGTTTCCATGTTCAATCAACCCGTTACCGTTTGGTATGCTTTGGGTAAAATGTGGAACCTTGTGGCGAAAGATAGATGGGTTATTTTCGCTGCTTTTTCTGCTCTTATCATTGCAGCAGTTTCGGAGATTTCTATACCACATTTTTTGACAGCATCGATATTCTCGGCGCAAGGTGGTGATATTAAAGTTTTTCATGGGAATGTGCGTTTGCTGATTCTCATGTGTGTTACTTCTGGAATTTGCAGTGGGATACGAGGTTGCTTTTTTGGCATTGCAAACATGATTCTGGTTAAGAGAATGAGAGAAACATTATACTCTTCCCTTCTTCTTCAGGATATATCATTTTTTGACAATGAAACAGTAGGTGATTTGACAAGTAGACTTGGGGCAGATTGTCAGCAAGTTTCAAGAGTTATTGGAAATGATCTTAATTTGATACTGCGCAATGTCCTTCAGGGGGGAGGTTCATTAATCTACTTGTTGATTTTGTCTTGGCCACTTGGTTTATGTACGCTGGTGATATGCTCCATATTAGCAGCGGTCATGTTACGTTATGGATGGTACCAGAAGAAGGCAGCAAGGTTGATCCAAGAAGTCACTGCTTCTGCTAATAATGTAGCTCAAGAGACATTCTCTCTTATTAGAACTGTTCGAGTTTATGGAACTGAAGAAGAAGAACACGGAAGGTACAAATGGTGGCTTGAAAAATTAGCTGACATAAGCTTGCGACAAAGCGCTGCATATGGATTTTGGAATTTCAGCTTCAACACTCTTTATCATTCAACTCAGATTATTGCTGTGCTGTTTGGAGGAATGTCTATTCTATCGGGTCATATTACAGCAGAGAAACTTACTAAGTTTATACTATATAGTGAATGGTTAATTTATTCAACCTGGTGGGTGGGGGATAATGTATCCAATTTAATGCAATCAGTTGGAGCTAGTGAAAAGGTGTTCAACTTGATGGATCTCTCACCTAGCAACCAATTTATAACAGAAGGAGTGAAGTTGCAGAGTTTAACAGGGCATATTGAGTTTGTAAATGTATCTTTTCACTATCCTTCAAGACCAACGGTACATGTAGTGCAGCATGTAAACTTTGTTGTCAATCCTAGTGAGGTGGTTGCCATTGTTGGTCTTAGTGGTAGCGGGAAAAGCACTTTGGTGAATCTATTACTCCGTCTCTACGAGCCTACAAGTGGTCAGATTTTGATAGACGGTGTCCCTCACAAAGACTTGGATGTCATGTGGTGGAGAGAGAGGATCGGATATGTGGGACAGGAACCGAAGTTATTCCGGATGGATATTAGCTCGAACATCAGATATGGATGTACCCGCGATGTAAATCAGGAGGATATTGAGTGGGCTGCAAAGCAGGCCTATGCTCATGACTTTATCTCAGCACTTCCTAGTGGTTATGAGACACTTGTTGATGACGATCTTTTAAGTGGCGGACAAAAGCAACGAATTGCTATCGCTAGGGCCATTCTTAGGGACCCGAAAATATTGATTCTTGATGAAGCCACTAGTGCATTGGATGCTGAAAGTGAACATAATGTGAAGGGTGTTCTTCGATCGGTTAGAAGTGATTCTTCAACAAGGAGAAGTGTCATAGTCATTGCACACAGGCTTTCTACCATACAAGCCGCTGACAGGATTATTGTGATGGATAAGGGTCAAATAGTTGAGAATGGAAGTCACAGGGAACTTCTCTTGAAAGACGGTCTATATGCTCGATTGACTAGAAAGCAGGCTGATACCATGGAATGA | 2106 | 0.4169 | MPPLLTNTHHYHYLLPPSTSHNRHHHRHRHCHQPLITFSSVNRHHFTLSSSKRILLSSSIKSSSINEVSIHNNSESASNASDEFLDRIRKLVSFLPSIFPGGTWWNFSDDVEVSMFNQPVTVWYALGKMWNLVAKDRWVIFAAFSALIIAAVSEISIPHFLTASIFSAQGGDIKVFHGNVRLLILMCVTSGICSGIRGCFFGIANMILVKRMRETLYSSLLLQDISFFDNETVGDLTSRLGADCQQVSRVIGNDLNLILRNVLQGGGSLIYLLILSWPLGLCTLVICSILAAVMLRYGWYQKKAARLIQEVTASANNVAQETFSLIRTVRVYGTEEEEHGRYKWWLEKLADISLRQSAAYGFWNFSFNTLYHSTQIIAVLFGGMSILSGHITAEKLTKFILYSEWLIYSTWWVGDNVSNLMQSVGASEKVFNLMDLSPSNQFITEGVKLQSLTGHIEFVNVSFHYPSRPTVHVVQHVNFVVNPSEVVAIVGLSGSGKSTLVNLLLRLYEPTSGQILIDGVPHKDLDVMWWRERIGYVGQEPKLFRMDISSNIRYGCTRDVNQEDIEWAAKQAYAHDFISALPSGYETLVDDDLLSGGQKQRIAIARAILRDPKILILDEATSALDAESEHNVKGVLRSVRSDSSTRRSVIVIAHRLSTIQAADRIIVMDKGQIVENGSHRELLLKDGLYARLTRKQADTME* | 702 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mtr5g1355 | 701 | Gene3D | - | 446 | 701 | IPR027417 | - | |
Mtr5g1355 | 701 | Pfam | ABC transporter transmembrane region | 142 | 407 | IPR011527 | GO:0005524|GO:0016021|GO:0055085|GO:0140359 | |
Mtr5g1355 | 701 | SUPERFAMILY | ABC transporter transmembrane region | 128 | 438 | IPR036640 | GO:0005524|GO:0016021 | |
Mtr5g1355 | 701 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 141 | 422 | IPR011527 | GO:0005524|GO:0016021|GO:0055085|GO:0140359 | |
Mtr5g1355 | 701 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 456 | 695 | IPR003439 | GO:0005524 | |
Mtr5g1355 | 701 | PANTHER | ABC TRANSPORTER B FAMILY | 81 | 700 | - | - | |
Mtr5g1355 | 701 | PANTHER | ABC TRANSPORTER B FAMILY MEMBER 26, CHLOROPLASTIC | 81 | 700 | - | - | |
Mtr5g1355 | 701 | CDD | ABC_6TM_TAP | 143 | 430 | - | - | |
Mtr5g1355 | 701 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 448 | 696 | IPR027417 | - | |
Mtr5g1355 | 701 | ProSitePatterns | ABC transporters family signature. | 594 | 608 | IPR017871 | GO:0005524 | |
Mtr5g1355 | 701 | Pfam | ABC transporter | 475 | 622 | IPR003439 | GO:0005524 | |
Mtr5g1355 | 701 | Gene3D | ABC transporter type 1, transmembrane domain | 124 | 441 | IPR036640 | GO:0005524|GO:0016021 | |
Mtr5g1355 | 701 | SMART | AAA_5 | 483 | 672 | IPR003593 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mtr5g1355 | Mtr-Chr5 | 14161233 | 14169183 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mtr5g1355 | 211 | 701 | Calmodulin-binding Proteins | AT2G36910 | 34.800 | 5.59e-73 | 255 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mtr5g1355 | - | - | gmx:100813359 | 1071.61 |