Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1355 ATGCCTCCACTACTCACAAACACACATCACTATCATTACTTACTTCCTCCTTCAACCTCTCACAACCGCCATCACCACCGTCACCGCCACTGCCACCAACCTCTTATCACATTCTCCTCCGTCAACCGCCACCATTTCACCCTCTCTTCTTCCAAACGCATTCTCTTATCCTCTTCAATAAAATCATCTTCCATCAATGAAGTTTCAATCCACAACAATTCAGAATCAGCTTCCAATGCTTCTGACGAGTTTCTTGACAGAATACGCAAATTGGTTTCTTTCCTTCCTTCTATTTTCCCTGGAGGAACATGGTGGAACTTCTCCGATGATGTCGAGGTTTCCATGTTCAATCAACCCGTTACCGTTTGGTATGCTTTGGGTAAAATGTGGAACCTTGTGGCGAAAGATAGATGGGTTATTTTCGCTGCTTTTTCTGCTCTTATCATTGCAGCAGTTTCGGAGATTTCTATACCACATTTTTTGACAGCATCGATATTCTCGGCGCAAGGTGGTGATATTAAAGTTTTTCATGGGAATGTGCGTTTGCTGATTCTCATGTGTGTTACTTCTGGAATTTGCAGTGGGATACGAGGTTGCTTTTTTGGCATTGCAAACATGATTCTGGTTAAGAGAATGAGAGAAACATTATACTCTTCCCTTCTTCTTCAGGATATATCATTTTTTGACAATGAAACAGTAGGTGATTTGACAAGTAGACTTGGGGCAGATTGTCAGCAAGTTTCAAGAGTTATTGGAAATGATCTTAATTTGATACTGCGCAATGTCCTTCAGGGGGGAGGTTCATTAATCTACTTGTTGATTTTGTCTTGGCCACTTGGTTTATGTACGCTGGTGATATGCTCCATATTAGCAGCGGTCATGTTACGTTATGGATGGTACCAGAAGAAGGCAGCAAGGTTGATCCAAGAAGTCACTGCTTCTGCTAATAATGTAGCTCAAGAGACATTCTCTCTTATTAGAACTGTTCGAGTTTATGGAACTGAAGAAGAAGAACACGGAAGGTACAAATGGTGGCTTGAAAAATTAGCTGACATAAGCTTGCGACAAAGCGCTGCATATGGATTTTGGAATTTCAGCTTCAACACTCTTTATCATTCAACTCAGATTATTGCTGTGCTGTTTGGAGGAATGTCTATTCTATCGGGTCATATTACAGCAGAGAAACTTACTAAGTTTATACTATATAGTGAATGGTTAATTTATTCAACCTGGTGGGTGGGGGATAATGTATCCAATTTAATGCAATCAGTTGGAGCTAGTGAAAAGGTGTTCAACTTGATGGATCTCTCACCTAGCAACCAATTTATAACAGAAGGAGTGAAGTTGCAGAGTTTAACAGGGCATATTGAGTTTGTAAATGTATCTTTTCACTATCCTTCAAGACCAACGGTACATGTAGTGCAGCATGTAAACTTTGTTGTCAATCCTAGTGAGGTGGTTGCCATTGTTGGTCTTAGTGGTAGCGGGAAAAGCACTTTGGTGAATCTATTACTCCGTCTCTACGAGCCTACAAGTGGTCAGATTTTGATAGACGGTGTCCCTCACAAAGACTTGGATGTCATGTGGTGGAGAGAGAGGATCGGATATGTGGGACAGGAACCGAAGTTATTCCGGATGGATATTAGCTCGAACATCAGATATGGATGTACCCGCGATGTAAATCAGGAGGATATTGAGTGGGCTGCAAAGCAGGCCTATGCTCATGACTTTATCTCAGCACTTCCTAGTGGTTATGAGACACTTGTTGATGACGATCTTTTAAGTGGCGGACAAAAGCAACGAATTGCTATCGCTAGGGCCATTCTTAGGGACCCGAAAATATTGATTCTTGATGAAGCCACTAGTGCATTGGATGCTGAAAGTGAACATAATGTGAAGGGTGTTCTTCGATCGGTTAGAAGTGATTCTTCAACAAGGAGAAGTGTCATAGTCATTGCACACAGGCTTTCTACCATACAAGCCGCTGACAGGATTATTGTGATGGATAAGGGTCAAATAGTTGAGAATGGAAGTCACAGGGAACTTCTCTTGAAAGACGGTCTATATGCTCGATTGACTAGAAAGCAGGCTGATACCATGGAATGA 2106 0.4169 MPPLLTNTHHYHYLLPPSTSHNRHHHRHRHCHQPLITFSSVNRHHFTLSSSKRILLSSSIKSSSINEVSIHNNSESASNASDEFLDRIRKLVSFLPSIFPGGTWWNFSDDVEVSMFNQPVTVWYALGKMWNLVAKDRWVIFAAFSALIIAAVSEISIPHFLTASIFSAQGGDIKVFHGNVRLLILMCVTSGICSGIRGCFFGIANMILVKRMRETLYSSLLLQDISFFDNETVGDLTSRLGADCQQVSRVIGNDLNLILRNVLQGGGSLIYLLILSWPLGLCTLVICSILAAVMLRYGWYQKKAARLIQEVTASANNVAQETFSLIRTVRVYGTEEEEHGRYKWWLEKLADISLRQSAAYGFWNFSFNTLYHSTQIIAVLFGGMSILSGHITAEKLTKFILYSEWLIYSTWWVGDNVSNLMQSVGASEKVFNLMDLSPSNQFITEGVKLQSLTGHIEFVNVSFHYPSRPTVHVVQHVNFVVNPSEVVAIVGLSGSGKSTLVNLLLRLYEPTSGQILIDGVPHKDLDVMWWRERIGYVGQEPKLFRMDISSNIRYGCTRDVNQEDIEWAAKQAYAHDFISALPSGYETLVDDDLLSGGQKQRIAIARAILRDPKILILDEATSALDAESEHNVKGVLRSVRSDSSTRRSVIVIAHRLSTIQAADRIIVMDKGQIVENGSHRELLLKDGLYARLTRKQADTME* 702
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1355 701 Gene3D - 446 701 IPR027417 -
Mtr5g1355 701 Pfam ABC transporter transmembrane region 142 407 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr5g1355 701 SUPERFAMILY ABC transporter transmembrane region 128 438 IPR036640 GO:0005524|GO:0016021
Mtr5g1355 701 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 141 422 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr5g1355 701 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 456 695 IPR003439 GO:0005524
Mtr5g1355 701 PANTHER ABC TRANSPORTER B FAMILY 81 700 - -
Mtr5g1355 701 PANTHER ABC TRANSPORTER B FAMILY MEMBER 26, CHLOROPLASTIC 81 700 - -
Mtr5g1355 701 CDD ABC_6TM_TAP 143 430 - -
Mtr5g1355 701 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 448 696 IPR027417 -
Mtr5g1355 701 ProSitePatterns ABC transporters family signature. 594 608 IPR017871 GO:0005524
Mtr5g1355 701 Pfam ABC transporter 475 622 IPR003439 GO:0005524
Mtr5g1355 701 Gene3D ABC transporter type 1, transmembrane domain 124 441 IPR036640 GO:0005524|GO:0016021
Mtr5g1355 701 SMART AAA_5 483 672 IPR003593 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Mtr5g1355 Mtr-Chr5 14161233 14169183 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g1355 211 701 Calmodulin-binding Proteins AT2G36910 34.800 5.59e-73 255
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1355 - - gmx:100813359 1071.61