Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1354 ATGAACCTTGATCCTGTTTTTCTTTCAAAACCCATTTTCCTTCATGGATTATCTACCTTAATTCATGTACTGTTGCTTGTTTCGGTTTTAGTCTCATGGGTTTGGAAAAAAATCACAACTTGTGTTATCAATGAGTGTAAGGAGAGACCAAACAGCACTTGGTTTAATAAAATCACAAAGTTTTGTTCTATTGGTTTCTCTTCTTTCAATTTTGTTCTCTTTCTGTTCAATTATTTTTACTGGTATAGAAATGGTTGGTCAGATGAAAAAGTTGTTACCCTTTTTGATTTAGCTCTCAAAACAGTTACTTGGTTTGTTGTTTTTGTTTGTTTCCACAAAGGGTTCTTCTTTTTCTTGAGCTCAGGTCAAAGAAAAAGAAAGTTTTCATTCTTCTTTAGAGCTTGGTGTGTTTTCTATCTTTTTGTTTCATGTTATTGTTTTGTGGTTGACATTGTTGTTCTTTATGAAAATCACATTGAGTTAACGGTTCAATGCATGGTTTCTGATGTGGTATCATTTTGTGTTGGTTTGTTCTTTTGTTATGTGGGGTATTGTGTGAAAAACGAGAGTGAAGAAAGTGATGAAACTATTCACGAGCCTCTTTTGAATGGTGATACACATGTTGGTAACGATAATGCTTTAGAGTTGAACAAGACTAAAGGGAGTGACACTGTTACTCCTTTTTCAAATGCTGGAATTTGGAGTCTTCTCACCTTCACTTGGGTGAGTCCACTTATAGCATTTGGCAATAAGAAGACGTTAGACCTTGAGGATGTTCCTCAGCTAGATAGTAGAGATAGTGTGGTTGGAGCTTTTCCTATTTTCAGAGACAAACTTGAAGCTGATTGTGGTGCAATCAATAGAGTAACCACACTTAAGTTGGTTAAGTCATTGATAATCTCAGGGTGGAAAGAAATTCTTATCACTGCTTTTCTTGCATTGGTAAACACTTTTTCTACTTATGTTGGTCCTTATCTTATTGATTCTTTTGTTCAATACATTGACGGAAAAAGGTTATATGAGAATCAAGGCTATGTGTTGGTTTCTTCCTTTTTATTTGCAAAGCTTGTAGAGTGCTTAACAGAAAGACATTTGTACTTTAGGTTGCAGCAACTAGGACTTCGAATCCGTGCACTGCTTGTGACGATCATATATAATAAAGCCTTAACACTTTCATGTCAATCAAAGCAGTGTCACAGTTCTGGAGAAATTATCAATTTCATAACTGTTGATGCCGAAAGAGTTGGTACTTTTGGTTGGTACATGCATGATTTGTGGTTACTAGCTTTGAAAGTTACATTGGCATTGTTAATTTTGTATAAGAACATTGGACTCGCTTCAATTGCTACTTTTGTTTCAACCGTTGTGGTTATGTTGGCAAATGTTCCATTGGGATCATTGCAAGAGAAGTTTCAAGATAAGTTGATGGAGTCAAAGGATGCTAGAATGAAAACCACGTCTGAAATTTTAAGGAACATGAGGATCCTTAAACTACAAGGATGGGAAATGAAGTTTCTATCTAAAATAACTGCACTCAGGGATGCCGAACAAGGCTGGTTGAAAAAATATCTTTACACTTCAGCCATGACTACATTTGTCTGTGCACCTACGTTCGTATCTGTGGTTACTTTTGGTACTTGTATGCTCATAGGGGTCCCACTTGAATCAGGGAAGATTTTGTCAGTACTTGCAACATTCAAGATTCTTCAAGAGCCTATTTATAATCTTCCAGATGTAATTTCAATGATAGCACAAACTAAAGTTTCTCTTGATAGGATTGCATCGTTCCTTCGCCTTGATGACTTGCAGTCCGATATTGTCGAAAAGCTTCCTCCTGGTAGTTCTGATACAGCAATTGAAGTGGTTGATGGGAATTTTTCTTGGGATTTATCTTCGCCTAGTCCAACTGTGCAGAACATAAATCTCAAAGTTTTTCATGGCATGAAGGTTGCTGTTTGTGGTACTGTTGGATCAGGAAAGTCTACTTTACTTTCTTGTGTACTGGGAGAAGTACCAAAGATATCAGGCGTTGTTAAGGTTTGTGGAGAAAAGGCCTACGTTGCTCAATCACCATGGATTCAAAGTGGCAAGATAGAGGATAATATATTGTTTGGCAAACAAATGGTTAGGGAAAGGTATGAAAAGGTACTCGAAGCTTGCTACTTAAAGAAGGATCTGGAAATCTTGTCATTTGGTGATCAAACGGTTATAGGCGAGCGCGGAATAAATTTGAGTGGTGGACAGAAACAAAGAATACAAATTGCGCGCGCTCTTTACCAAGATGCTGATATCTATCTATTTGATGATCCTTTTAGTGCTGTGGATGCTCATACAGGATCTCACCTTTTTAAGGAATGCTTGCTGGGTGTTTTAAGCTCAAAAACAGTTGTTTATGTTACTCATCAAGTGGAGTTCTTACCTACTGCTGACCTTATATTGGTCATGAAAGATGGAAAAATTACTCAAAGTGGAAAGTATGCTGATCTGCTTAACATTGGGACTGATTTTATGGAACTTGTCGGTGCACACAGAGAAGCTTTGTCCACACTTGAATCATTGGATGAAGGAAAAACATCTAATGAAATAAGTACATTAGAACAAGAAGAAAATATCTCTGGCACACATGAAGAGGCAAACAAAGATGAGCAAAATGGTAAATCAGGTGATAAAGGCGAACCACAAGGCCAACTCGTTCAAGAAGAAGAAAGGGAAAAAGGTAAAGTTGGATTTTCAGTGTATTGGAAGTATATCACAACTGCATATGGGGGAGTTCTTGTACCATTCATATTATTGGCTCATATTCTTCTTCAAGCTCTTCAAATTGGAAGCAACTATTGGATGGCTTTGGCAACTCCCATCTCAGCCGATGTCAAGCCACCGATTGAAGGAACAACTCTTATGAAAGTCTATGTTGGTTTGGCCATTGGAAGTTCTCTATGCATTCTTGTTAAAGGGTTGTTACTTGTTACAGCTGGTTATAAGACAGCTACTATACTCTTCAATAAAATGCACTTGTGCATTTTCCGTGCCCCGATGTCATTTTTTGATTCTACTCCAAGTGGACGAATCCTCAATAGAGCTTCTACTGACCAAAGTGAAGTGGATACAGGCCTTCCTTATCAAGTAAGCTCATTTGCCTTTTCCATGATCCAGCTTCTTGGAATTATAGCCGTGATGTCTCAGGTTGCATGGCAAGTTTTCATTGTCTTTATACCCGTAATAGTAGTCAGCATTTGGTATCAGCGATATTATTCACCATCAGCCCGTGAACTGTCGCGTTTGGGTGGAGTATGTGAAGCCCCAATCATTCAACACTTTGTGGAAACAATTTCCGGTACTTCGACCATTAGAAGCTTTGATCAACAGTCAAGATTTCATGAAACAAATATGAAACTGACTGATGGGTATTCTCGGCCAAATTTCAACATTTCTGCTGCTATGGAATGGTTATCTTTACGCTTAGATATGTTGTCTTCCATCATATTTGCCTTTTCCTTGGCATTCTTGATATCGATTCCACCTGGAATCATGAATCCAGGCATTGCTGGTCTAGCTGTTACCTATGGTCTAAGTTTAAACATGATACAAGCTTGGGCGATATGGATTCTTTGCAACTTGGAGAACAAAATTATATCGGTTGAAAGGATAGTTCAGTATACAACCATTCCTAGTGAGCCTCCCCTTGTTTCAGAAGAAGAAAATAGGCCAGATCCTTCCTGGCCTGCATATGGCGAGGTTGATATACTGAACTTGCAGGTTCGATATGCTCCACATCTTCCGCTCGTGTTGCGTGGCCTGACATGCATGTTTCGTGGAGGATTGAAAACTGGCATTGTTGGTAGAACAGGTAGCGGCAAATCAACTCTTATACAAACACTTTTCCGTCTCGTTGAACCTACTGCTGGGGAAATTATCATTGACGGCATCAACATCTCTACAATCGGACTGCATGATTTAAGGTCAAGACTAAGCATTATTCCGCAAGATCCAACAATGTTTGAGGGGACAGTGAGAACTAATCTGGACCCCCTTGAAGAGTACACCGATGAACAAATATGGGAGGCGTTGGATAAGTGCCAACTGGGAGATGAAGTTAGAAAGAAAGAAGGAAAGCTTGACTCTTCAGTTAGTGAGAATGGTGAGAATTGGAGCATGGGTCAGAGGCAGTTGGTTTGCCTTGGTAGGGTTCTGCTTAAGAAGAGCAAGATTTTGGTGCTTGATGAAGCAACTGCTTCGGTTGATACAGCTACAGATAATTTGATTCAGCAAACTCTTAGGAAGCATTTCACTGACTCCACGGTCATTACCATTGCGCATCGAATAACTTCTGTTCTTGACAGTGATATGGTTCTACTTCTTAGTCAAGGACTTATTGAGGAGTATGACTCCCCAAACACATTGCTAGAGGATAACTCATCATCTTTTGCTAAGCTTGTTGCAGAGTATACCATGAGGTCCAACTCCAATTTATGA 4473 0.3894 MNLDPVFLSKPIFLHGLSTLIHVLLLVSVLVSWVWKKITTCVINECKERPNSTWFNKITKFCSIGFSSFNFVLFLFNYFYWYRNGWSDEKVVTLFDLALKTVTWFVVFVCFHKGFFFFLSSGQRKRKFSFFFRAWCVFYLFVSCYCFVVDIVVLYENHIELTVQCMVSDVVSFCVGLFFCYVGYCVKNESEESDETIHEPLLNGDTHVGNDNALELNKTKGSDTVTPFSNAGIWSLLTFTWVSPLIAFGNKKTLDLEDVPQLDSRDSVVGAFPIFRDKLEADCGAINRVTTLKLVKSLIISGWKEILITAFLALVNTFSTYVGPYLIDSFVQYIDGKRLYENQGYVLVSSFLFAKLVECLTERHLYFRLQQLGLRIRALLVTIIYNKALTLSCQSKQCHSSGEIINFITVDAERVGTFGWYMHDLWLLALKVTLALLILYKNIGLASIATFVSTVVVMLANVPLGSLQEKFQDKLMESKDARMKTTSEILRNMRILKLQGWEMKFLSKITALRDAEQGWLKKYLYTSAMTTFVCAPTFVSVVTFGTCMLIGVPLESGKILSVLATFKILQEPIYNLPDVISMIAQTKVSLDRIASFLRLDDLQSDIVEKLPPGSSDTAIEVVDGNFSWDLSSPSPTVQNINLKVFHGMKVAVCGTVGSGKSTLLSCVLGEVPKISGVVKVCGEKAYVAQSPWIQSGKIEDNILFGKQMVRERYEKVLEACYLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKECLLGVLSSKTVVYVTHQVEFLPTADLILVMKDGKITQSGKYADLLNIGTDFMELVGAHREALSTLESLDEGKTSNEISTLEQEENISGTHEEANKDEQNGKSGDKGEPQGQLVQEEEREKGKVGFSVYWKYITTAYGGVLVPFILLAHILLQALQIGSNYWMALATPISADVKPPIEGTTLMKVYVGLAIGSSLCILVKGLLLVTAGYKTATILFNKMHLCIFRAPMSFFDSTPSGRILNRASTDQSEVDTGLPYQVSSFAFSMIQLLGIIAVMSQVAWQVFIVFIPVIVVSIWYQRYYSPSARELSRLGGVCEAPIIQHFVETISGTSTIRSFDQQSRFHETNMKLTDGYSRPNFNISAAMEWLSLRLDMLSSIIFAFSLAFLISIPPGIMNPGIAGLAVTYGLSLNMIQAWAIWILCNLENKIISVERIVQYTTIPSEPPLVSEEENRPDPSWPAYGEVDILNLQVRYAPHLPLVLRGLTCMFRGGLKTGIVGRTGSGKSTLIQTLFRLVEPTAGEIIIDGINISTIGLHDLRSRLSIIPQDPTMFEGTVRTNLDPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSSVSENGENWSMGQRQLVCLGRVLLKKSKILVLDEATASVDTATDNLIQQTLRKHFTDSTVITIAHRITSVLDSDMVLLLSQGLIEEYDSPNTLLEDNSSSFAKLVAEYTMRSNSNL* 1491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1354 1490 MobiDBLite consensus disorder prediction 858 902 - -
Mtr5g1354 1490 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 307 585 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr5g1354 1490 Gene3D - 602 864 IPR027417 -
Mtr5g1354 1490 ProSitePatterns ABC transporters family signature. 744 758 IPR017871 GO:0005524
Mtr5g1354 1490 SUPERFAMILY ABC transporter transmembrane region 926 1227 IPR036640 GO:0005524|GO:0016021
Mtr5g1354 1490 CDD ABCC_MRP_domain1 619 819 - -
Mtr5g1354 1490 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 928 1208 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr5g1354 1490 CDD ABC_6TM_ABCC_D2 926 1220 IPR044726 GO:0140359
Mtr5g1354 1490 SMART AAA_5 646 819 IPR003593 -
Mtr5g1354 1490 SMART AAA_5 1272 1464 IPR003593 -
Mtr5g1354 1490 MobiDBLite consensus disorder prediction 870 888 - -
Mtr5g1354 1490 Gene3D - 1228 1482 IPR027417 -
Mtr5g1354 1490 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 619 842 IPR003439 GO:0005524
Mtr5g1354 1490 PANTHER MULTIDRUG RESISTANCE PROTEIN ABC TRANSPORTER FAMILY PROTEIN 106 1489 - -
Mtr5g1354 1490 Gene3D ABC transporter type 1, transmembrane domain 890 1226 IPR036640 GO:0005524|GO:0016021
Mtr5g1354 1490 Gene3D ABC transporter type 1, transmembrane domain 286 601 IPR036640 GO:0005524|GO:0016021
Mtr5g1354 1490 CDD ABC_6TM_ABCC_D1 308 593 IPR044746 GO:0140359
Mtr5g1354 1490 Pfam ABC transporter 638 771 IPR003439 GO:0005524
Mtr5g1354 1490 Pfam ABC transporter 1265 1411 IPR003439 GO:0005524
Mtr5g1354 1490 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1246 1480 IPR003439 GO:0005524
Mtr5g1354 1490 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 106 1489 - -
Mtr5g1354 1490 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 616 841 IPR027417 -
Mtr5g1354 1490 Pfam ABC transporter transmembrane region 928 1170 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr5g1354 1490 Pfam ABC transporter transmembrane region 307 572 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr5g1354 1490 CDD ABCC_MRP_domain2 1244 1464 - -
Mtr5g1354 1490 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1238 1472 IPR027417 -
Mtr5g1354 1490 SUPERFAMILY ABC transporter transmembrane region 298 598 IPR036640 GO:0005524|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1354 Mtr-Chr5 14147106 14153530 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g1354 629 849 Calmodulin-binding Proteins AT2G36910 32.129 1.12e-21 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1354 - K05666 gmx:100777836 2319.66