Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1353 ATGATCGGACTCTCTGAACCCGCTTCGGGTTCTCCCAAATCCACCATCAAATTCCTCTGTAGCTATGGTGGCAAAATCCTCCCCCGTTACCCGGATGGCAAACTCCGTTACCTCGGTGGCCATAATCGCGTTCTCTCCGTTGATCGCTCTATACAATTCTCCGAACTGTTATTGAAGCTGAAAGAGCTCTGCAGTTCATCCGTAACGCAACTTCGCTGTCAGTTACCTGCTGAAGACCTCGACGCTTTGGTTTCCATCACCTCCGACGAAGATCTCATCAATCTAATCGAAGAATATGATCGTACTGCATCACCACAATCACAGTTAAAGATCAAAGCCTTCATTTCTCCACCAAGATCTTCAAACAAGGCTTCTAAACCTCCATTACCGTCTCTGTCAAAATCAGCATCTGTCTCTTCCTCATCCTCTGCATCATCGACGTCATCTTCATCATCTTATTGCAGCGTTAATGGTGGAGGTTCCAGCCAGAAGTACACGACAGAGCAGCCTGTAGTTTACCGATGCGTTCATCATATGTCACAACAGACTGTCAATCATGGAAACATGGAGAGATCTTCTGGGAGGAATGTTCCTCTGCCGCGCAGCGGTTACCAATCTCAGAGGAACACTGATCAAAATTATCTGATTCACAACGGCAACCATTGGCAATAA 672 0.4658 MIGLSEPASGSPKSTIKFLCSYGGKILPRYPDGKLRYLGGHNRVLSVDRSIQFSELLLKLKELCSSSVTQLRCQLPAEDLDALVSITSDEDLINLIEEYDRTASPQSQLKIKAFISPPRSSNKASKPPLPSLSKSASVSSSSSASSTSSSSSYCSVNGGGSSQKYTTEQPVVYRCVHHMSQQTVNHGNMERSSGRNVPLPRSGYQSQRNTDQNYLIHNGNHWQ* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1353 223 MobiDBLite consensus disorder prediction 184 223 - -
Mtr5g1353 223 PANTHER OCTICOSAPEPTIDE/PHOX/BEM1P FAMILY PROTEIN 9 222 - -
Mtr5g1353 223 MobiDBLite consensus disorder prediction 198 223 - -
Mtr5g1353 223 Gene3D - 34 113 - -
Mtr5g1353 223 MobiDBLite consensus disorder prediction 114 160 - -
Mtr5g1353 223 PANTHER OS05G0427100 PROTEIN-RELATED 9 222 - -
Mtr5g1353 223 SMART PB1_new 30 114 IPR000270 GO:0005515
Mtr5g1353 223 Pfam PB1 domain 32 114 IPR000270 GO:0005515
Mtr5g1353 223 SUPERFAMILY CAD & PB1 domains 32 124 - -
Mtr5g1353 223 CDD PB1_UP2 19 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1353 Mtr-Chr5 14109829 14111096 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g1353 16 115 MAP Kinase Kinase Kinase AT5G57610 48.000 8.35e-28 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1353 - - gmx:100815157 226.868