Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mtr5g1353 | ATGATCGGACTCTCTGAACCCGCTTCGGGTTCTCCCAAATCCACCATCAAATTCCTCTGTAGCTATGGTGGCAAAATCCTCCCCCGTTACCCGGATGGCAAACTCCGTTACCTCGGTGGCCATAATCGCGTTCTCTCCGTTGATCGCTCTATACAATTCTCCGAACTGTTATTGAAGCTGAAAGAGCTCTGCAGTTCATCCGTAACGCAACTTCGCTGTCAGTTACCTGCTGAAGACCTCGACGCTTTGGTTTCCATCACCTCCGACGAAGATCTCATCAATCTAATCGAAGAATATGATCGTACTGCATCACCACAATCACAGTTAAAGATCAAAGCCTTCATTTCTCCACCAAGATCTTCAAACAAGGCTTCTAAACCTCCATTACCGTCTCTGTCAAAATCAGCATCTGTCTCTTCCTCATCCTCTGCATCATCGACGTCATCTTCATCATCTTATTGCAGCGTTAATGGTGGAGGTTCCAGCCAGAAGTACACGACAGAGCAGCCTGTAGTTTACCGATGCGTTCATCATATGTCACAACAGACTGTCAATCATGGAAACATGGAGAGATCTTCTGGGAGGAATGTTCCTCTGCCGCGCAGCGGTTACCAATCTCAGAGGAACACTGATCAAAATTATCTGATTCACAACGGCAACCATTGGCAATAA | 672 | 0.4658 | MIGLSEPASGSPKSTIKFLCSYGGKILPRYPDGKLRYLGGHNRVLSVDRSIQFSELLLKLKELCSSSVTQLRCQLPAEDLDALVSITSDEDLINLIEEYDRTASPQSQLKIKAFISPPRSSNKASKPPLPSLSKSASVSSSSSASSTSSSSSYCSVNGGGSSQKYTTEQPVVYRCVHHMSQQTVNHGNMERSSGRNVPLPRSGYQSQRNTDQNYLIHNGNHWQ* | 224 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mtr5g1353 | 223 | MobiDBLite | consensus disorder prediction | 184 | 223 | - | - | |
Mtr5g1353 | 223 | PANTHER | OCTICOSAPEPTIDE/PHOX/BEM1P FAMILY PROTEIN | 9 | 222 | - | - | |
Mtr5g1353 | 223 | MobiDBLite | consensus disorder prediction | 198 | 223 | - | - | |
Mtr5g1353 | 223 | Gene3D | - | 34 | 113 | - | - | |
Mtr5g1353 | 223 | MobiDBLite | consensus disorder prediction | 114 | 160 | - | - | |
Mtr5g1353 | 223 | PANTHER | OS05G0427100 PROTEIN-RELATED | 9 | 222 | - | - | |
Mtr5g1353 | 223 | SMART | PB1_new | 30 | 114 | IPR000270 | GO:0005515 | |
Mtr5g1353 | 223 | Pfam | PB1 domain | 32 | 114 | IPR000270 | GO:0005515 | |
Mtr5g1353 | 223 | SUPERFAMILY | CAD & PB1 domains | 32 | 124 | - | - | |
Mtr5g1353 | 223 | CDD | PB1_UP2 | 19 | 111 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mtr5g1353 | Mtr-Chr5 | 14109829 | 14111096 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mtr5g1353 | 16 | 115 | MAP Kinase Kinase Kinase | AT5G57610 | 48.000 | 8.35e-28 | 108 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mtr5g1353 | - | - | gmx:100815157 | 226.868 |