Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1327 ATGGATCCTTTCAAAGGATCCGGATCCGAAAACCCGATCGGAACATGCATCTCTCTCCTTTCCGCCCGCAACTTCACCACCGCCAGCGACTTCGCCCGCCGCTTACCACTCTCCGATTCAGTCGGCCGAATCCTCACAATCGCAGACGTTCTCTCCGCCGCCGACCACTACTCCGTCCTCCGTCTCCCCCGCTCCGAATCCGTCAACCGTGACCTAGCTCGCCAGCATTACGCCAAATTCGCAATCCTCTTAGATCCCACTAGCTCCGAGAAATTCCCTTTTCAAGATGAAGCCCTAGCTCGTGTTCGTGAAGCCTGGCACGTTCTCTCCGACCCCGGAAAACGCACTGTTTATGACCGTGGTGGTGGTGTAACCGCCGCCACCACTGCGGCGTTTTGGACTGCGTGTCCTTATTGTTGGAATTTGTATCAGTATGAGAAAAAATACGAAGATTGTTCTTTGATGTGTCAAACTTGTATGAAAACTTTTCACGGTGTGGCGGTGAAGTCACCGGTGAAAGTTGGTGCAACCGTCGTAGAAGGGGAGGAGAAGAGGCAGTATTATAAGTGTAAGGCAAGAGTGCCGTTGAAGTTTTACGAAGTGAAAAACGGTGATGAGAGCTTAATGGGTGAAAATGAAGCTGAATTTGTTTATGTTTCTGATGATGATGGTGATTGGGAGAAAGAATGGGGGAATGTGGGTGATGCTGGTGTGAGAAATGAAGGTTTTGAGAAGGTGAATCAAACAGTGGAAACAGCGCAAGGAAACGATAAACGAAAGATGAGGGTTAAGACTGTGGCAAGGAAGAGTGTTGTGAACAGAATAACAAGATTTGATTTTGGTAATGATTTGGGTTTGGATGGAAAGGATTGTGAATTGGAGTTTACTGAAGGTGCTGATGATGTCTTTGTTGGGGTGAGGTTTAATGGATGA 933 0.4802 MDPFKGSGSENPIGTCISLLSARNFTTASDFARRLPLSDSVGRILTIADVLSAADHYSVLRLPRSESVNRDLARQHYAKFAILLDPTSSEKFPFQDEALARVREAWHVLSDPGKRTVYDRGGGVTAATTAAFWTACPYCWNLYQYEKKYEDCSLMCQTCMKTFHGVAVKSPVKVGATVVEGEEKRQYYKCKARVPLKFYEVKNGDESLMGENEAEFVYVSDDDGDWEKEWGNVGDAGVRNEGFEKVNQTVETAQGNDKRKMRVKTVARKSVVNRITRFDFGNDLGLDGKDCELEFTEGADDVFVGVRFNG* 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1327 310 Gene3D DnaJ domain 48 123 IPR036869 -
Mtr5g1327 310 ProSiteProfiles dnaJ domain profile. 55 122 IPR001623 -
Mtr5g1327 310 Pfam DnaJ domain 55 119 IPR001623 -
Mtr5g1327 310 SUPERFAMILY Chaperone J-domain 48 122 IPR036869 -
Mtr5g1327 310 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 1 310 - -
Mtr5g1327 310 PANTHER CHAPERONE DNAJ-DOMAIN PROTEIN 1 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1327 Mtr-Chr5 13801404 13802747 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g1327 7 216 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 28.226 1.83e-25 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1327 - - mtr:MTR_5g032370 624.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g1327 5 13801404 13802747 Mtr8g2124 8 31250400 31251538 PCT