Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1323 ATGGCGGCTTTGCTGAAGCTTGGAAAGAAGAGAATATATATGAACTTCACCAGAGCTTTGGCTACAACATCATGTAGGCATGTGGTAGGGTCAAGTTTTGCATCTATATTTGCTTCACAATCTGTTTATGCATCAGCAAGATGCATGCCTGATTTCATCAATCACTCATGTATAGGTGGGGCTGGTTATAGTAGTGGGACTAAAGAATGTGGAATACGGTGCTTCCATGCTAGCTCACAAGTCTGGTCAAGAAGTGATGCAGCGTATGGTTTGAAGCCCCCAAAGAGGGAGAAGTATGTGAGAAAAGGCAGTAGAAACCAGCCTCCTGTTGACGCTCCACACGTCCCTTGTAAAGTCACTGCAACCAAATCTAATCCCGATAAAACGATAGAAATATTTGAAGGCATGACCCTTGTTGAACTGGCAAAGCGTTCTGGAAAATCAGTATCTTCTTTGCAAGATATTCTCACAACTGTTGGCGAAAAAATTCAATCAGAGTTTGAGCCTCTCAGTATGGATATTTCTGAGCTTGTTGCAATGGAAGTTGGTGTCAATGTTAAGAGGTTGCATTCAACTGAAGGTAAAGAAGTTTTACCCCGCCCTCCAGTTGTAACAGTGATGGGTCATGTTGATCATGGAAAAACTTCCCTTCTTGATGCCTTGCGTCAAACGTCAGTGGCAGCTAAGGAAGCTGGTGGCATTACTCAGCATCTAGGTGCCTTTGTGGTGGGCATGTCATCAGGAGCATCAATCACATTTCTCGACACTCCTGGTCACGCTGCATTTAGTGCCATGCGAGCAAGAGGTGCAGCAGTCACAGATATAGTAGTGCTAGTTGTTGCTGCAGATGACGGTGTAATGCCCCAAACACTTGAAGCTGTGTCTCATGCGAAATCAGCTAATGTACCAGTTGTAGTTGCAGTCAATAAATGTGATAAACCAGGTGCAAATCCTGAAAAAGTAAAACTACAGCTTGCTTCAGAGGGCTTGCTGTTAGAGGAGATGGGTGGGGATATTCAGGTTGTTGAAGTTTCCGCGCTTAAAAAGACTGGACTGGATAACCTAGAGGAAGCTTTACTCCTTCAGGCTGATATGATGGATCTTAAAGCACGATTTGATGGTCCTGCTCAAGCATATGTGGTTGAAGCAAGACTTGACAAAGGACGGGGTCCATTGGTGACTACTATAGTGAAGGCAGGGACTCTAGTTTGTGGACAGCATGTGGTTGTAGGCTCGCAGTGGGGAAAAATAAGGGCTATTAAAGATGCAGCAGGGAGGTTAACTCAACGAGCAACTCCGGCAATGCCTGTGGAGATTGAAGGGCTTCGAGGGCTGCCAATGGCCGGTGACGATGTCATTGCTGTTCATTCTGAGGAGCGGGCTAGAATGCTTAGTTCTGGTAGGAAAAAGAAATTTGAAGAGGACAGGCTTAGAGGTAAGATAGTGCATATCCCAACTACTTCAGATGATACTGAGGAGGTTCCAAAGAGGGTTGAAATGGCAGTAATTGTAAAAGGAGATGTTCAGGGAACTGTTCAAGCTGTTACAGATGCATTGACAACTTTAAATAGTCCTCAGGTTTCTGTGAATGTTGTCCATGTTGGCGTGGGGCCTATTTCTCAATCCGACGTGGACCTAGCACAGGCTTGCGGTGCATGCATAGTTGGATTCAATGTCAAGAGTCCACCTATTTCTCTTACCCAAGCAGCAACTCGTGCTAGTATCAAGGTAATTATGCACCGTGTGATTTACCACGTATTGGAAGACGTAGCCAATCTGATAATAGAGAAGGCCCCAGGTACACCCGAGACTCAGGTGGCTGGGCAAGCAGAAGTGCTGAATATCTTCGAAGTGAAAGGGAGCAAATCTAAGGGACCTGATGTGAAAATAGCTGGTTGCAAAGTTGTTGAAGGTTTTGTGAACAGGTCAGCAACCATGAGGCTTCTAAGGAGTGGTGAAATGGTGTTTGAAGGACCTTGTTCGTCTCTTAAGAGGGAGAAGCAGGATGTGGATTCTGTGAAGAAAGGAAATGAGTGTGGACTAGTAATCAATAACTGTTGTGATTTCCAGATTGGTGATGTTATACAGTGCTTAGAACAAGTAGTTAGGAAGCCCAAGTTTATTAAGTCGGAGAGTGGTGCTGTTCGAATAGAGTGCTGA 2160 0.4491 MAALLKLGKKRIYMNFTRALATTSCRHVVGSSFASIFASQSVYASARCMPDFINHSCIGGAGYSSGTKECGIRCFHASSQVWSRSDAAYGLKPPKREKYVRKGSRNQPPVDAPHVPCKVTATKSNPDKTIEIFEGMTLVELAKRSGKSVSSLQDILTTVGEKIQSEFEPLSMDISELVAMEVGVNVKRLHSTEGKEVLPRPPVVTVMGHVDHGKTSLLDALRQTSVAAKEAGGITQHLGAFVVGMSSGASITFLDTPGHAAFSAMRARGAAVTDIVVLVVAADDGVMPQTLEAVSHAKSANVPVVVAVNKCDKPGANPEKVKLQLASEGLLLEEMGGDIQVVEVSALKKTGLDNLEEALLLQADMMDLKARFDGPAQAYVVEARLDKGRGPLVTTIVKAGTLVCGQHVVVGSQWGKIRAIKDAAGRLTQRATPAMPVEIEGLRGLPMAGDDVIAVHSEERARMLSSGRKKKFEEDRLRGKIVHIPTTSDDTEEVPKRVEMAVIVKGDVQGTVQAVTDALTTLNSPQVSVNVVHVGVGPISQSDVDLAQACGACIVGFNVKSPPISLTQAATRASIKVIMHRVIYHVLEDVANLIIEKAPGTPETQVAGQAEVLNIFEVKGSKSKGPDVKIAGCKVVEGFVNRSATMRLLRSGEMVFEGPCSSLKREKQDVDSVKKGNECGLVINNCCDFQIGDVIQCLEQVVRKPKFIKSESGAVRIEC* 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1323 719 Hamap Translation initiation factor IF-2 [infB]. 9 705 IPR000178 GO:0003743|GO:0003924|GO:0005525|GO:0006413
Mtr5g1323 719 SUPERFAMILY Translation proteins 373 455 IPR009000 -
Mtr5g1323 719 Pfam Elongation factor Tu GTP binding domain 204 360 IPR000795 GO:0003924|GO:0005525
Mtr5g1323 719 PANTHER TRANSLATION INITIATION FACTOR IF-2, MITOCHONDRIAL 85 710 - -
Mtr5g1323 719 CDD mtIF2_IVc 608 697 - -
Mtr5g1323 719 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 199 369 IPR000795 GO:0003924|GO:0005525
Mtr5g1323 719 Gene3D - 495 600 IPR036925 -
Mtr5g1323 719 CDD IF2_eIF5B 202 366 - -
Mtr5g1323 719 TIGRFAM small_GTP: small GTP-binding protein domain 202 355 IPR005225 GO:0005525
Mtr5g1323 719 Pfam Translation-initiation factor 2 493 590 IPR023115 -
Mtr5g1323 719 Gene3D - 197 371 IPR027417 -
Mtr5g1323 719 SUPERFAMILY Translation proteins 603 704 IPR009000 -
Mtr5g1323 719 Gene3D Translation factors 372 483 - -
Mtr5g1323 719 Gene3D Translation factors 603 704 - -
Mtr5g1323 719 PANTHER TRANSLATION INITIATION FACTOR IF-2-RELATED 85 710 IPR015760 -
Mtr5g1323 719 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 196 367 IPR027417 -
Mtr5g1323 719 SUPERFAMILY Initiation factor IF2/eIF5b, domain 3 494 607 IPR036925 -
Mtr5g1323 719 CDD IF2_mtIF2_II 375 470 IPR044145 -
Mtr5g1323 719 TIGRFAM IF-2: translation initiation factor IF-2 127 702 IPR000178 GO:0003743|GO:0003924|GO:0005525|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1323 Mtr-Chr5 13711861 13718728 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g1323 190 683 Eukaryotic Initiation Factors Gene Family AT1G76810 26.808 1.36e-28 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1323 K02519 - gmx:100781314 1153.66