Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1321 ATGGCTCTTCCTGGTTCCCTGCAATTGTCTCATGGCCTGGGACTTTGCAGGAACCTCAACAGTAATAAAGATCGGAGGGTAAAGGGGAGATGCAAGTTACAGTTAGACAACCTTCCTTTGCAGCTCATGAAACAGGACTACAGGGGTCTTCAACACCTCCATCATATAAACAGGTCAACACATAGATTGTCTCGCAAATCACGCTCTTTTAAATGTCATTGTTTTTTAGTGCCAGGCGAGCGAATTGCACTTTCTTCTGTTAAGGTGGCTACTACAGTACTGACAAGGTGCTGTAATGTTTTACAAAACAGTCCAGTCATTGTAAAGTTGATTCCCGCTGTTGGCATTATCATTTTTGCAGTATGGGGTGTTGGCCCATTAACGTTTCAGACAAGGAAACTGTTTTTTCAGAAGAGTGATAATAGTTGGAAAAAAAGTACCACTCATTACATAGTAACTTCATACCTTCGACCACTACTGTTATGGACTGGAGCCGTACTTATTTGCAGAGCATTTGAGCCAGTAATTCTGCCTACAGAAGCTAGCCAGGCTGTTAAGGAACGACTTTTGAATTTTGTTAAATCGTTGGCGACTGTAGTGGCTTTTGCTTATTGTTTATCAAGTGTGATTCAACAAGCACAGAAAATTGTAACAGAGAATGTAGATGCAAGCGAGACAAGAAATATGGGATTCCAATTTGCAGGCAAAGCTGTTTATTCTGCAGTATGGATTGCTGCTTTTTCATTGTTTATGGAATTGCTGGGCTTTTCTACCCAGAAATGGGTCACAGCAGGAGGTTTTGGAACAGTTTTGTTGACTCTTGCTGGCCGTGAGATATTTACAAACTTCCTTTCAAGCGCGATGATTCATGCAACTCGACCTTTTGTGGTAAATGAATGGATTCAAACGAAGATTGAAGGATATGAGGTGTCTGGCACTGTTGAGCATGTTGGCTGGTGGTCACCAACAATTATACGAGGTGAAGATCGTGAAGCTGTACACATTCCAAACCACAAATTCACAGTGAATGTTGTGCGGAATCTAACTCAAAAAACACATTGGAGAATCAAAACCCACCTAGCCATTAGTCATTTGGATGTAAATAAGATTAATAACATTGTTGCTGACATGCGGAAAGTATTAGCCAAAAATCCTCAAGTTGAGCAGCAGAGGTTGCACAGGAGAGTGTTTTTGGACAACATAAACCCTGAAAATCAGGCGCTTATGATTCTGATTTCGTGTTTTGTCAAGACCTCACATTTTGAAGAATATTTGTGTGTTAAGGAAACTATACTATTGGATCTTCTTAGAGTTATCAGCCATCACCGGGCCCGGCTTGCAACACCAGTCCGTACCCTGCAGAAAATATATGCTGATGCCGACTTGGACAACATACCATACGCAGATACCACATTTAATGGTGCTGGACCAGTAGTATCTAACCGCCCATTATTAGTGATTGATTCACCTTACAAGAACAATGCAGATGATAAAACAAAAAGTCGATCAACACGTGCAACTGTTGATCAAGATGACAAAACAACCGTGCGAACTAAACTCGATTCCAAGACAGAGGATAAGGTTGAACCAATTGGAGCACCAGATACTAAGGTTAGAGGAACTCAAGATGAATCCGAGGTAGATGCCAAAGTCATGGCATCTAACTCTGATGTGGGTGAAAACAAGCCACTGAAATCTAATTTAAACAAGGCAAACATGGAGGTGCCGGAAATGTCTTCTACTTCTAACTCCAAAGTAACTGGTCTGGAAGTAGATAATTCAACCATGAAGGACATCCATGTCAAACAATCCAAGGTTCAAACAGTTAAAAACACCAAGCCAAACGTCGACTCGGACAATCTAGTTTCCTCATCAACAAACAACGCTGACAAAGCCAATGGAAATATGGCAACAAACCAGCAAGGAGAAAGGAAACCTGCTCCACCCAGGCCTGTTCTTGAAGAGAATATAGTACTAGGTGTTGCATTGGATGGATCAAAGAGAACACTTCCTATCAATGATGAGATTGACACTGTGACAACTCAAGAGACAAAGGAAATGGCTGCATCCCAGGGTGGAAATGGATCTCCAAAGGCTTCAGATGGGAATGTGAAGTAA 2118 0.4155 MALPGSLQLSHGLGLCRNLNSNKDRRVKGRCKLQLDNLPLQLMKQDYRGLQHLHHINRSTHRLSRKSRSFKCHCFLVPGERIALSSVKVATTVLTRCCNVLQNSPVIVKLIPAVGIIIFAVWGVGPLTFQTRKLFFQKSDNSWKKSTTHYIVTSYLRPLLLWTGAVLICRAFEPVILPTEASQAVKERLLNFVKSLATVVAFAYCLSSVIQQAQKIVTENVDASETRNMGFQFAGKAVYSAVWIAAFSLFMELLGFSTQKWVTAGGFGTVLLTLAGREIFTNFLSSAMIHATRPFVVNEWIQTKIEGYEVSGTVEHVGWWSPTIIRGEDREAVHIPNHKFTVNVVRNLTQKTHWRIKTHLAISHLDVNKINNIVADMRKVLAKNPQVEQQRLHRRVFLDNINPENQALMILISCFVKTSHFEEYLCVKETILLDLLRVISHHRARLATPVRTLQKIYADADLDNIPYADTTFNGAGPVVSNRPLLVIDSPYKNNADDKTKSRSTRATVDQDDKTTVRTKLDSKTEDKVEPIGAPDTKVRGTQDESEVDAKVMASNSDVGENKPLKSNLNKANMEVPEMSSTSNSKVTGLEVDNSTMKDIHVKQSKVQTVKNTKPNVDSDNLVSSSTNNADKANGNMATNQQGERKPAPPRPVLEENIVLGVALDGSKRTLPINDEIDTVTTQETKEMAASQGGNGSPKASDGNVK* 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1321 705 PANTHER MECHANOSENSITIVE ION CHANNEL-LIKE PROTEIN 1 705 - -
Mtr5g1321 705 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 1 705 IPR045042 -
Mtr5g1321 705 MobiDBLite consensus disorder prediction 491 546 - -
Mtr5g1321 705 MobiDBLite consensus disorder prediction 673 705 - -
Mtr5g1321 705 MobiDBLite consensus disorder prediction 595 651 - -
Mtr5g1321 705 SUPERFAMILY Sm-like ribonucleoproteins 279 349 IPR010920 -
Mtr5g1321 705 Gene3D - 295 350 IPR023408 -
Mtr5g1321 705 MobiDBLite consensus disorder prediction 600 642 - -
Mtr5g1321 705 Pfam Mechanosensitive ion channel 236 443 IPR006685 GO:0016020|GO:0055085
Mtr5g1321 705 MobiDBLite consensus disorder prediction 493 546 - -
Mtr5g1321 705 MobiDBLite consensus disorder prediction 668 705 - -
Mtr5g1321 705 Gene3D - 189 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1321 Mtr-Chr5 13681359 13688661 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g1321 9 701 Mechanosensitive Ion Channel Family AT5G10490 53.541 0.0 724
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1321 K22047 - gmx:100789444 1061.21