Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1301 ATGGAACCGATTCAATCCAACGAATTTCACAATGATCCACAAACCCTAATCCCAAACCAGCAAGAAGATTCAGTAATGGAAGATGAAAACGATTCCTTGTTCGATTCTATGCTTGTTGATTCAAGTTCAAAACTCATTCAAAATGGCTTCGCCAGATCTCAAAGTTCAGAGGAGTGTGTAATGTTTGTAAACGCGGGAGGGGAAGCGACTAATGAAGGAGCTGATGGAGTGAAGTTTCTGAGTGACACTTTTTTTGACGGTGGCAATGTTTTCCACACGAATGAGGCGATTGTGGAAGGTGGAGATTACCCATCGATTTATCAGTCAGCTCGGGTGGGAAGTTTTAGTTATAGAATTGATAACCTTCCTCCTGGACAATATCTTGTTGACCTGCATTTTGTTGAGATTATTAATGTAAATGGGCCGAAAGGAATGAGGGTGTTCAATGTTTACATACAAGAAGAAAAGGTTCTATCTGAATTGGATATCTATGCAGCTGTTGGAGTCAACAAGCCGCTACAGCTGATTGATTGTCGGGCCACTGTGAAGGATGATGGGGTGATTCTCATAAGATTTGAGAGTTTAAATGGAAGCCCAGTTGTCAGTGGGATCTGCATTAGGAGAGCGTCAAAAGAGTCAGTTCCACCAGTGCCAAGCGATTTTATTGAATGTAACTACTGTGCTGCGCAGATTGAAATTCCTTCATCACAGATAAAAGTTATGCAGACAAAATCTACAGCAAAGTATGAAAATAAGATAAAGGAGCTTACTATGCAGTGCGAGCTCAAAGCAAAAGAATGCTATGAGGCGTGGACGTCATTAACTGAAATGAGTAGGAAAGTGGAAAAAGTCCAGATGGAGCTTGATCAAGTGACATTTAAGTCACTCACTACAGAACAAACTGCCGAAAAACAAGCTGAGAACCTGAGGAGTATTTCTAACAGATATGAACTTGATAAGAAGAAATGGGCAGAAGCAATTATCAGTTTACAGGAAAAAGTACAGTTGATGAAGAGTGAGCAGTCTCGGCTTTCCTTTGAAGCACATGAATGTGTTGATTCAATCCCTGAATTAAACAAGATGGTTTATGCAGTACAGGAGTTGGTTAAGCAGTGTGAAGATCTTAAAGTGAAGTATTATGAAGAGATGACACAGAGAAAGAAGCTCTTCAATGAAGTTCAAGAGGCTAAAGGAAACATCAGAGTTTTTTGCCGTTGTCGACCATTGAATAAGGTTGAAATGTCAGCTGGGTGTACAACAGTTGTGGATTTTGATGCAGCAAAAGATGGATGCCTTGGGATTTTGGCAACTGGCTCCTCTAAAAAATCATTCAGATTTGACAGGGTTTATACACCAAAAGATGATCAAGTTGATGTTTTTGCTGATGCATCATCAATGGTAATCTCTGTGCTGGATGGCTACAATGTTTGCATCTTTGCTTATGGACAAACAGGAACAGGAAAAACATTTACTATGGAAGGAACAGAGCAAAATAGAGGTGTAAATTACAGGACTCTTGAGCATTTGTTTAGAGTTAGTAAGGAAAGGAGTGAAACATTTTCATACGACATATCTGTTAGTGTGCTCGAGGTTTACAATGAACAAATCAGAGACCTATTGGCTACGGGACCAGCATCAAAAAGGTTGGAGATAAAACAAAATTATGAAGGACATCATCATGTACCTGGTGTTGTAGAAGCCAAGGTTGACAACATAAGTGACGTGTGGACTGTACTGCAAGCTGGAAGCAATGCTAGAGCAGTTGGAAGTAATAATGTTAATGAACATAGTAGTCGATCTCATTGCATGCTATGTATAATGGTAAAGACTAAAAATTTGATGAATGGTGAGTGTACCAAGAGCAAGCTTTGGCTTGTGGATTTGGCAGGCAGTGAGAGACTTGCAAAGACTGATGTGCAAGGAGAGCGACTTAAGGAGGCACAAAATATTAATCGTTCTCTTTCTGCTCTTGGAGATGTGATATCCGCTTTAGCTGCCAAAAGTAGTCACATTCCGTATAGGAATTCTAAGTTGACACATTTACTCCAAGACTCACTAGGAGGTGACTCAAAAACTTTGATGTTTGTACAAATAAGTCCATCAGACCAGGATGTCGGTGAGACTCTGAGCTCACTTAATTTTGCAACTAGAGTGAGGGGCGTTGAGTTAGGTCCTGTTAAGAAGCAAATTGATACAGGCGAACTTCAAAAGACAAAAGCAATGCTTGACAAAGCACGAAGTGAGTGCAGAAGTAAAGAAGAATCCTTGAGGAAATTAGAAGAAAGTTTGCAAAACATTGAGAGCAAGGCCAAGGGAAAGGATAATATCCACAAAAATCTACAAGAAAAGATTAAAGAACTTGAAGGTCAGATTGAGCTCAAAACATCCATGCAAAACCAATCAGAGAAACAAGTTTCTCAATTATGTGAAAAGTTGAAGGGAAAAGAAGAAACCTGCTGTACTCTTCAACATAAGGTCAAAGAGCTAGAGAGAAAAATAAAAGAACAACTGCAGACAGAGACAGCAAATTTCCAACAGAAGGCTTGGGATCTAGAAAAGAAGCTGAAAGATCAGTTGCAAGGGTCTGAGTCTGAATCTTCCTTTCTAAAAGATAAGATCAAGGAGCTTGAGAGAAAACTGAAAGAGCAGGAGCAGAACTCGGAATCCTTGCTAAAACAACAGATGAAGGAACTAGAGGAGAAATACAAGGAGCGAGAGCAACAGTGGCAGCAAACTCATTGTTATGTTGAAGCAGTAAAGGCGGCGGCCACACCTGATATAGGTAAAAGCCGCACAAGTGAAGAATGTCCAAATGATATTGAGAGTCGCATTTTATGTAGTTCAAACTCGGTAAACCGCCAGATAAGTCAAGGTTCTGCTTTGTTAAAAGGGACTGATTCTACTCAGCAGATGAGAAACAAAAGGCAGTTAAGAAGCAATGACATTGAGAACAATTTAGTCGGGCCACCGTCATCCACTTTACGCGATAGAAAAATGACAAGGAAATCTGATCCGCCTAAAATTGTAAGAACTGGTAGGCTAACAACGAAACCGCCGGTCATTACTAGTCAAGTTCCTTTGTCTCATAAGAGAGCTAGCACAAGCAGAGATCAGTCTCAAGGAGTTAAAGAGAGGGATAGTAAGAAAAAGATATGGTCAAGATAG 3165 0.4013 MEPIQSNEFHNDPQTLIPNQQEDSVMEDENDSLFDSMLVDSSSKLIQNGFARSQSSEECVMFVNAGGEATNEGADGVKFLSDTFFDGGNVFHTNEAIVEGGDYPSIYQSARVGSFSYRIDNLPPGQYLVDLHFVEIINVNGPKGMRVFNVYIQEEKVLSELDIYAAVGVNKPLQLIDCRATVKDDGVILIRFESLNGSPVVSGICIRRASKESVPPVPSDFIECNYCAAQIEIPSSQIKVMQTKSTAKYENKIKELTMQCELKAKECYEAWTSLTEMSRKVEKVQMELDQVTFKSLTTEQTAEKQAENLRSISNRYELDKKKWAEAIISLQEKVQLMKSEQSRLSFEAHECVDSIPELNKMVYAVQELVKQCEDLKVKYYEEMTQRKKLFNEVQEAKGNIRVFCRCRPLNKVEMSAGCTTVVDFDAAKDGCLGILATGSSKKSFRFDRVYTPKDDQVDVFADASSMVISVLDGYNVCIFAYGQTGTGKTFTMEGTEQNRGVNYRTLEHLFRVSKERSETFSYDISVSVLEVYNEQIRDLLATGPASKRLEIKQNYEGHHHVPGVVEAKVDNISDVWTVLQAGSNARAVGSNNVNEHSSRSHCMLCIMVKTKNLMNGECTKSKLWLVDLAGSERLAKTDVQGERLKEAQNINRSLSALGDVISALAAKSSHIPYRNSKLTHLLQDSLGGDSKTLMFVQISPSDQDVGETLSSLNFATRVRGVELGPVKKQIDTGELQKTKAMLDKARSECRSKEESLRKLEESLQNIESKAKGKDNIHKNLQEKIKELEGQIELKTSMQNQSEKQVSQLCEKLKGKEETCCTLQHKVKELERKIKEQLQTETANFQQKAWDLEKKLKDQLQGSESESSFLKDKIKELERKLKEQEQNSESLLKQQMKELEEKYKEREQQWQQTHCYVEAVKAAATPDIGKSRTSEECPNDIESRILCSSNSVNRQISQGSALLKGTDSTQQMRNKRQLRSNDIENNLVGPPSSTLRDRKMTRKSDPPKIVRTGRLTTKPPVITSQVPLSHKRASTSRDQSQGVKERDSKKKIWSR* 1055
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1301 1054 Coils Coil 859 912 - -
Mtr5g1301 1054 MobiDBLite consensus disorder prediction 1036 1054 - -
Mtr5g1301 1054 Coils Coil 834 854 - -
Mtr5g1301 1054 Gene3D - 55 211 - -
Mtr5g1301 1054 Pfam Kinesin motor domain 405 720 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mtr5g1301 1054 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 399 756 IPR027417 -
Mtr5g1301 1054 PRINTS Kinesin heavy chain signature 473 494 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mtr5g1301 1054 PRINTS Kinesin heavy chain signature 591 608 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mtr5g1301 1054 PRINTS Kinesin heavy chain signature 622 640 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mtr5g1301 1054 PRINTS Kinesin heavy chain signature 671 692 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mtr5g1301 1054 Gene3D Kinesin motor domain 344 723 IPR036961 -
Mtr5g1301 1054 SMART kinesin_4 397 729 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mtr5g1301 1054 ProSitePatterns Kinesin motor domain signature. 621 632 IPR019821 GO:0003777|GO:0005524|GO:0007018
Mtr5g1301 1054 MobiDBLite consensus disorder prediction 958 991 - -
Mtr5g1301 1054 MobiDBLite consensus disorder prediction 1016 1035 - -
Mtr5g1301 1054 Pfam Malectin domain 61 203 IPR021720 -
Mtr5g1301 1054 PANTHER KINESIN-LIKE PROTEIN KLP-3 28 1040 - -
Mtr5g1301 1054 ProSiteProfiles Kinesin motor domain profile. 399 721 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mtr5g1301 1054 Coils Coil 735 797 - -
Mtr5g1301 1054 CDD KISc_C_terminal 397 723 - -
Mtr5g1301 1054 PANTHER KINESIN-LIKE PROTEIN KIN-14R 28 1040 - -
Mtr5g1301 1054 MobiDBLite consensus disorder prediction 958 1054 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1301 Mtr-Chr5 13404635 13412428 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g1301 371 774 Calmodulin-binding Proteins AT5G65930 41.076 6.38e-86 301