Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1298 ATGGAAAACACATTATCAAATGAAAAGGAAGTACCTGTCTTCGGGTGGGCAGCTAGAGAATCCTCAGGAATTCTCTCCCCCTTTAGCTTCTCTAGAAGGGCAAATGGAGATCGTGATATCACCATAAAGATACTCTTTTGTGGGGTTTGCCATGGAGACGTTCATTTCGCCAAGAATGAGTTAGGCCATAGCCTCTATCCCATGGTTCCCGGACATGAGATAGTGGGTGAAGTAATGAAGGTGGGCCAAAGTGTGACAAAATTCAAAATTGGTGACATAGCAGGAGTGGGACCATTATGTGGTTCATGTGGTTTATGTTCCAATTGCTCCAAAGGTTGGGAAAATTATTGCTCCAAACAAATTTTAACTTATAATTCACATGACCATGATGGATCAATAACCTATGGTGGATACTCAAATAAAATAGTGGTTAATGAGCATTTTGCTATTATGATGCCAAAAGGGTTACCACTAGAAGGTGCAGCTCCATTGCTATGTGCTGGATCAACAGTTTATAGTCCAATGATGCATCATGGACTGTGTCAAAGTGGACAACATTTAGGTGTAGTTGGGTTAGGTGGACTTGGTCATGTTGCAGTCAAGTTTGCTAAGGCTTTCAAAATGAAAGTCACTGTGATAAGTACTTCTCCTGGAAAGAAAGAAGAAGCTTTGGAAAGGCTTGGTGCTGATTCATTCTTGCTCATGAATGATCAACAACAATTGCAGGAAGCAAAGGACACAATGGACGGCATCATAGACACAGTTTCAGGCCCTCATTCACTCTACCCATTAATTGAAATGTTGAAGACATGTGGCAAATTAATTTTAGTTGGTGCATCAGTTACACCTCCTATCTTGCCATATATGCCTTTAATGTCTGGGAGGAAGATAATTGCAGGTAGTGCTGGGGGAGGAATGAAAGAGAGCCAAGACATGATTGATTTTGCAGCAAAGCACAATATTACAGCAGATATTGAAGTGATTTCAATGGATTATGTGAACACTGCTTTTGAGAGACTTGCAAAGAATGATGTTAAATACCGATTTGTCATTGATGTGGCTAATACTCTTAAGTAA 1077 0.403 MENTLSNEKEVPVFGWAARESSGILSPFSFSRRANGDRDITIKILFCGVCHGDVHFAKNELGHSLYPMVPGHEIVGEVMKVGQSVTKFKIGDIAGVGPLCGSCGLCSNCSKGWENYCSKQILTYNSHDHDGSITYGGYSNKIVVNEHFAIMMPKGLPLEGAAPLLCAGSTVYSPMMHHGLCQSGQHLGVVGLGGLGHVAVKFAKAFKMKVTVISTSPGKKEEALERLGADSFLLMNDQQQLQEAKDTMDGIIDTVSGPHSLYPLIEMLKTCGKLILVGASVTPPILPYMPLMSGRKIIAGSAGGGMKESQDMIDFAAKHNITADIEVISMDYVNTAFERLAKNDVKYRFVIDVANTLK* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1298 358 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 156 321 IPR036291 -
Mtr5g1298 358 PANTHER ALDEHYDE REDUCTASE 1 358 - -
Mtr5g1298 358 SMART PKS_ER_names_mod 23 299 IPR020843 GO:0016491
Mtr5g1298 358 CDD CAD1 14 352 - -
Mtr5g1298 358 Pfam Zinc-binding dehydrogenase 194 317 IPR013149 -
Mtr5g1298 358 Pfam Alcohol dehydrogenase GroES-like domain 38 150 IPR013154 -
Mtr5g1298 358 Gene3D - 16 353 - -
Mtr5g1298 358 Gene3D - 167 323 - -
Mtr5g1298 358 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 71 85 IPR002328 GO:0008270|GO:0016491
Mtr5g1298 358 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE-LIKE PROTEIN 1 358 - -
Mtr5g1298 358 SUPERFAMILY GroES-like 20 185 IPR011032 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1298 Mtr-Chr5 13375216 13378091 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g1298 14 358 Monolignol Biosynthesis Gene Families AT4G37990 62.899 1.02e-142 407
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1298 - - aip:107621738 493.426