Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1296 ATGGCAATAGATGCTACTAAATTAGTAGTGTTTCCTAAGAAGGCCTTTGGATGGGCAGCTAGAGACTCTTCTGGTGTTCTATCCCCTTTCCATTTCTTTAGAAGGGAAACGGGTGAGAAAGATGTAGCATTCAAGGTGTTATATTGTGGGATATGTCACTCTGACCTTCACATTATGCAGAATGAATGGGGCAAAACCACCTATCCATTAGTCCCGGGGCACGAACTTACGGGTGTAGTAACAGAGGTGGGAAGCAAAGTAAAAAAGTTTAAAGTTGGAGACAAAGTAGGGGTGGGATACATGGTTGATTCATGTCGTTCTTGCGAAAATTGTGCCGACGATATTGAGAATTACTGCACCAAATATACTCAAACATTCAATGGTAAGTCTCGTGATGGCACTATCACCTATGGAGGTTTCTCCGACTCAATGGTTGCAGACGAGCACTTTGTGATTCGCATTCCTGATAGCTTACCTCTTGATGGTGCCGGTCCTCTTCTTTGCGCTGGAGTCACAGTGTATAGTCCTCTTCGACATTTTGGACTCGACAAGCCTGGTATGAATATAGGAGTTGTTGGTCTTGGTGGACTTGGTCATATGGCTGTGAAATTTGCTAAAGCTTTTGGTGCTAAAGTGACCGTAATTAGTACGTCGCCTAAAAAGGAAAAGGAAGCAATAGAACACTTAGGAGCAGACTCGTTTCTAGTAAGCCGCGATCCAGAACAGATGCAGGCTGCAACGAGTACTTTGAATGGCATTATTGACACAGTTTCGGCGAGTCATCCTGTTGTACCATTGATTGGTTTATTGAAATCTAATGGAAAGCTGGTAATGGTTGGTGCAGTAGCAAAGCCTCTAGAACTTCCTATATTTTCTTTACTTGGAGGGAGAAAGTCAATAGCTGGAAGTTTAATTGGAGGGATAAAAGAGACTCAAGAAATGATTGATTTTGCTGCTAAACACAATGTAACGCCTGAGATTGAGGTTGTTCCTATTGATTATGTCAACACCGCAATGGAGCGTCTTGTTAAAGGAGATGTCAAATATCGATTCGTGATTGATATTGGAAATTCACTAAAACCAAGCCCTTAA 1092 0.4212 MAIDATKLVVFPKKAFGWAARDSSGVLSPFHFFRRETGEKDVAFKVLYCGICHSDLHIMQNEWGKTTYPLVPGHELTGVVTEVGSKVKKFKVGDKVGVGYMVDSCRSCENCADDIENYCTKYTQTFNGKSRDGTITYGGFSDSMVADEHFVIRIPDSLPLDGAGPLLCAGVTVYSPLRHFGLDKPGMNIGVVGLGGLGHMAVKFAKAFGAKVTVISTSPKKEKEAIEHLGADSFLVSRDPEQMQAATSTLNGIIDTVSASHPVVPLIGLLKSNGKLVMVGAVAKPLELPIFSLLGGRKSIAGSLIGGIKETQEMIDFAAKHNVTPEIEVVPIDYVNTAMERLVKGDVKYRFVIDIGNSLKPSP* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1296 363 PANTHER ALDEHYDE REDUCTASE 7 362 - -
Mtr5g1296 363 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 73 87 IPR002328 GO:0008270|GO:0016491
Mtr5g1296 363 SUPERFAMILY GroES-like 22 186 IPR011032 -
Mtr5g1296 363 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE-LIKE PROTEIN 7 362 - -
Mtr5g1296 363 CDD CAD1 16 354 - -
Mtr5g1296 363 Pfam Alcohol dehydrogenase GroES-like domain 40 153 IPR013154 -
Mtr5g1296 363 Gene3D - 18 355 - -
Mtr5g1296 363 Pfam Zinc-binding dehydrogenase 196 319 IPR013149 -
Mtr5g1296 363 Gene3D - 169 325 - -
Mtr5g1296 363 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 158 323 IPR036291 -
Mtr5g1296 363 SMART PKS_ER_names_mod 25 353 IPR020843 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1296 Mtr-Chr5 13357188 13359457 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g1296 10 363 Monolignol Biosynthesis Gene Families AT4G37990 69.492 6.67e-170 476
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1296 - K23232 gmx:100816901 565.844