Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1292 ATGGCAACACAACCTGAATTTGAGCATCCAAAGAAGGCCTTCGGTTGGGCAGCTAGAGATCCTTCTGGTGTTCTCTCCACTTTCAATTTCTCCAGAAGGGAAACAGGTGAGAAAGATGTGGCATTCAAAGTGTTGTATTGCGGAATATGCCACACAGACCTCCACATGGCCAAGAACGGATGGGGCACATCCACCTATCCATTAGTTCCAGGGCACGAAATTGTTGGTGTAGTGACTTTGGATGGTATTATTGACACAATTTCTGCTGATCATTCCCTCTTACCCCTAATTGATTTACTAAAATCTCATGGAAAGCTTGTATTGGTTGGTGCCCCAGAGAAGCCTCTTGAGTTACCAGCATGGCCTTTACTAGTGGGGAGAAAAATGGTAGCTGGTAGTGGAATGGGAGGAATGAAGGAAACTCAAGAGATGATTGATTTTGCTGCTAAACACAATGTACAACCTGATATTGAAGTCATACCTATGGATTATGTCAACACAGCAATGGAGCGTGTCCACAAATCAGATGTTAAATATCGATTTGTGATTGACATTAGAAACACTCTTAAAACAAGCCCTTAA 582 0.4261 MATQPEFEHPKKAFGWAARDPSGVLSTFNFSRRETGEKDVAFKVLYCGICHTDLHMAKNGWGTSTYPLVPGHEIVGVVTLDGIIDTISADHSLLPLIDLLKSHGKLVLVGAPEKPLELPAWPLLVGRKMVAGSGMGGMKETQEMIDFAAKHNVQPDIEVIPMDYVNTAMERVHKSDVKYRFVIDIRNTLKTSP* 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1292 193 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 77 153 IPR036291 -
Mtr5g1292 193 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE-LIKE PROTEIN 1 79 - -
Mtr5g1292 193 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE-LIKE PROTEIN 78 192 - -
Mtr5g1292 193 SUPERFAMILY GroES-like 19 79 IPR011032 -
Mtr5g1292 193 Pfam Alcohol dehydrogenase GroES-like domain 38 79 IPR013154 -
Mtr5g1292 193 Gene3D - 80 155 - -
Mtr5g1292 193 Gene3D - 16 79 - -
Mtr5g1292 193 Gene3D - 156 185 - -
Mtr5g1292 193 PANTHER ALDEHYDE REDUCTASE 1 79 - -
Mtr5g1292 193 PANTHER ALDEHYDE REDUCTASE 78 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1292 Mtr-Chr5 13318872 13323075 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g1292 11 79 Monolignol Biosynthesis Gene Families AT4G37990 81.159 4.57e-35 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1292 - - mtr:MTR_5g031290 393.275