LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mtr5g1289	ATGGCAAGACAACCTGAATTTGAACATCCAAACAAGGCCTTTGGTTGGGCAGCTAGAGACACTTCTGGTGTTCTCTCCCCCTTCAACTTCTCTAGAAGAGAAACAGGAGAAAAAGATGTGGCATTCAAAATATTGTATTGTGGAATATGTCACTCAGATGTCTGCATGGCGAAGAACGAATGGGGCATATCAACCTATCCACTAGTTCCGGGGCATGAGATTGTTGGTATAGTGACAAAGGTGGGAAGCAAAGTAGAAAAGTTCAATGTTGGAGACAAAGTAGGTGTTGGCTACATAATTGATTCATGTCGATCGTGTCAAAATTGTGTTGACAATCTTGAAAATTACTGCCCCGCATACACTACTACAGTTGGTGGCATGCATCGTGATGGAACCATCACACACGGAGGTTATTCTGACTCATTGGTTGTGGCTGAGAACTTCGTGGTTCACATTCCTGATGGATTACCACTTGAAGCTGCTGCACCTCTCCTTTGTGCTGGGATCACTGTGTACAGTCCTCTTAGATACTTTGGACTCGACAAACCTGGTCTTCATGTCGGTGTTGTTGGTCTTGGTGGGCTTGGTCACATGGCTGTGAAATTTGCCAAAGCTTTTGGTGCTAATGTGACCGTAATTAGTACATCTGCTAGCAAAGAAAAGGAAGCAAAAGAACACTTAGGAGCTGATTCATTTCTGATAAGTCGTGACCAAGATAAAATGCAGTCTGCACTGGGTACTTTGGATGGTATCATTGATACCGTTTCAGCAAATCATCCTGTCTTGCCACTACTTGGATTACTGAAGTCTCATGGAAAACTTGTAATGGTTGGTGTACCTGACAAGCCTCTGGAGATCCCCGTCTTTCCTTTAATTTTGGGGAGAAAGCTGGTAGCTGGAAGTGGAATTGGAAGCATTAAGGAGACTCAAGAGATGCTTGAATTTGCTGCTAAACACAATGTAAAACCTGACATTGAAGTTGTTCCTGTGGATTATGTTAACACAGCAATTGAGCGACTCCTCAAAGCAGATGTCAAATATCGATTTGTGCTCGACATTGGAAACACTCTGAAACCAAGTTCTTAA	1086	0.43	MARQPEFEHPNKAFGWAARDTSGVLSPFNFSRRETGEKDVAFKILYCGICHSDVCMAKNEWGISTYPLVPGHEIVGIVTKVGSKVEKFNVGDKVGVGYIIDSCRSCQNCVDNLENYCPAYTTTVGGMHRDGTITHGGYSDSLVVAENFVVHIPDGLPLEAAAPLLCAGITVYSPLRYFGLDKPGLHVGVVGLGGLGHMAVKFAKAFGANVTVISTSASKEKEAKEHLGADSFLISRDQDKMQSALGTLDGIIDTVSANHPVLPLLGLLKSHGKLVMVGVPDKPLEIPVFPLILGRKLVAGSGIGSIKETQEMLEFAAKHNVKPDIEVVPVDYVNTAIERLLKADVKYRFVLDIGNTLKPSS*	362

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mtr5g1289	361	CDD	CAD1	14	352	-	-
	Mtr5g1289	361	PANTHER	CINNAMYL ALCOHOL DEHYDROGENASE-LIKE PROTEIN	1	360	-	-
	Mtr5g1289	361	Pfam	Alcohol dehydrogenase GroES-like domain	38	151	IPR013154	-
	Mtr5g1289	361	SUPERFAMILY	NAD(P)-binding Rossmann-fold domains	156	322	IPR036291	-
	Mtr5g1289	361	Pfam	Zinc-binding dehydrogenase	194	317	IPR013149	-
	Mtr5g1289	361	PANTHER	ALDEHYDE REDUCTASE	1	360	-	-
	Mtr5g1289	361	Gene3D	-	167	323	-	-
	Mtr5g1289	361	SMART	PKS_ER_names_mod	23	351	IPR020843	GO:0016491
	Mtr5g1289	361	Gene3D	-	16	353	-	-
	Mtr5g1289	361	SUPERFAMILY	GroES-like	20	184	IPR011032	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Mtr5g1289	Mtr-Chr5	13295841	13297418	Tandem

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mtr5g1289	11	360	Monolignol Biosynthesis Gene Families	AT4G37990	68.000	2.89e-165	464

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mtr5g1289	-		K23232	gmx:100816901	572.007

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