Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1285 ATGGCTCTCTCCAACTTAAAATCTAACAGAACTCTTTCTTCATCACTCATCACAATCTTCATCATTTCCCTCTTCCTACAATACCACAATATCAAATCACAATCATCATGGCAATCACGACAAGTACCACGATCAGAAACCGTTGCTTTCAGCATAACGGAATTCGAGAAAGAAAATCCCGACATATTTTTAAGGGGTGACACCTCAATCTCCGACGGCATTTTAAGACTAACAAAAACTGACCAATCTGGTAAACCACTCCCTAATACCGTTGGACGTGCGACATACCTCACGCCAATTCATATTTGGGATAAAACTAGTGGAGAACTAGCTGATTTCTCCACTAGTTTCTCCTTTATCGTGAACACAAACGATTCAGATCTCCATGGAGACGGATTCGCTTTCTATCTGGGACCACTACATTTTGACGTACCAAAAAATTCAAGCGGAGGGTATCTTGGTCTTTTCGACCCAGAAAATGCATTTCCTCCATCCAAAACCCCAATATTAGCTATTGAATTTGATGGTTTTACAAATGAATGGGACCCTCCTTCATCATTTCAATCTCCTCACATTGGAATTGATGTTGGGTCAATTGTTTCCCTTGAATATGCACAATGGCCTATTAATTTTGTGCCAAGAAATGCTTTAGGAGAAGCTAACATAAACTATAACTCAGAGTCTAAAAGATTGAGTGTGTTTGTGGCTTATCCTGGGACTCAGTGGAATTCCACTAGGGTTTCAGTTGTTGTTGATCTAAGGAGTGTTTTGCCTGAATGGGTTAGAATAGGTTTCTCTGCAACTACAGGAGAACTGGTTGAAACACATGATATCATTAATTGGTCTTTTGAATCAGCCTTGTAA 864 0.397 MALSNLKSNRTLSSSLITIFIISLFLQYHNIKSQSSWQSRQVPRSETVAFSITEFEKENPDIFLRGDTSISDGILRLTKTDQSGKPLPNTVGRATYLTPIHIWDKTSGELADFSTSFSFIVNTNDSDLHGDGFAFYLGPLHFDVPKNSSGGYLGLFDPENAFPPSKTPILAIEFDGFTNEWDPPSSFQSPHIGIDVGSIVSLEYAQWPINFVPRNALGEANINYNSESKRLSVFVAYPGTQWNSTRVSVVVDLRSVLPEWVRIGFSATTGELVETHDIINWSFESAL* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1285 287 PIRSF Plant_L_lectin 14 287 IPR016363 GO:0030246
Mtr5g1285 287 Pfam Legume lectin domain 49 285 IPR001220 GO:0030246
Mtr5g1285 287 SUPERFAMILY Concanavalin A-like lectins/glucanases 48 286 IPR013320 -
Mtr5g1285 287 PANTHER LECTIN 1 287 - -
Mtr5g1285 287 Gene3D - 45 287 - -
Mtr5g1285 287 PANTHER CONCANAVALIN A-LIKE LECTIN FAMILY PROTEIN 1 287 - -
Mtr5g1285 287 CDD lectin_legume_LecRK_Arcelin_ConA 50 287 IPR001220 GO:0030246
Mtr5g1285 287 ProSitePatterns Legume lectins alpha-chain signature. 257 266 IPR000985 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1285 Mtr-Chr5 13265355 13266854 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g1285 42 287 Receptor kinase-like Gene Family AT5G10530 36.508 2.35e-36 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1285 - - gmx:100802694 317.005
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g1285 5 13265355 13266854 Mtr8g2086 8 30816194 30818418 PCT
Mtr8g2085 8 30811968 30812756 Mtr5g1285 5 13265355 13266854 PCT