Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1284 ATGGCTCTCTCCAACTTAAAACCTAATCGATCAACTCTTTCTTCCGCACTTATTAAAATCTACATTACTTTCGTCTTCCTACAATACCATGTGAATTCACAATATTCACCATCACCATCGCACCAACCGAAAAATACCGTTTCTTTCACCATATTAGAATTCGAGAAAGAAAATCCAGACATATTTCTCAGGGGAGATGCCTCAATCTCTGGTGGCATTTTAAGACTGACAAAAACCGACCAGTCCGGTGAACCAATCCAAAAGAGTGTTGGTAGAGCAACACATCTCACACCAATTCACATTTGGGATAAAACTAGTGGAAAACTAGCAGATTTCTCCACTCGTTTCTTCTTTTTCGTGAACACAAATGGTTCAGAACTCCACGGAGATGGATTTGCTTTCTATATCGGACCACTTCATTTTGAAGTACCAAAAAATTCAAGTGGCGGCTATCTTGGTCTTTTCGACCCAGAAACTGCATTCGATCCTTCTAAAAATCCTATAATAGCTATTGAGTTTGATAGTTTTACAAATGGGTGGGATCCTGCTTCACCATCTCAATATCCTCACATTGGAATTGATGTTGGTTCTATTGATTCAGTTGCAACTGTGGACTGGCCTGTTGATTTTTTGCCAAGAAATGCTTTAGGAGAAGCTAACATAAACTATAACTCCGAGTCTAAAAGATTGAGTGTGTTTGTCAATTACCCTGGGAGTGGGAGGAAAGCAACTGGTGTCTCATTTGTTGTTGATTTGAGGAGTGTTCTGCCTGAATGGGTTAGAGTTGGTTTCTCTGCTGCTACCGGAGAGTTGGTTGAAATACATGATATAATTAATTGGTCTTTTGAATCATCTTTGTAA 861 0.3926 MALSNLKPNRSTLSSALIKIYITFVFLQYHVNSQYSPSPSHQPKNTVSFTILEFEKENPDIFLRGDASISGGILRLTKTDQSGEPIQKSVGRATHLTPIHIWDKTSGKLADFSTRFFFFVNTNGSELHGDGFAFYIGPLHFEVPKNSSGGYLGLFDPETAFDPSKNPIIAIEFDSFTNGWDPASPSQYPHIGIDVGSIDSVATVDWPVDFLPRNALGEANINYNSESKRLSVFVNYPGSGRKATGVSFVVDLRSVLPEWVRVGFSAATGELVEIHDIINWSFESSL* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1284 286 Pfam Legume lectin domain 47 285 IPR001220 GO:0030246
Mtr5g1284 286 SUPERFAMILY Concanavalin A-like lectins/glucanases 46 286 IPR013320 -
Mtr5g1284 286 ProSitePatterns Legume lectins alpha-chain signature. 256 265 IPR000985 -
Mtr5g1284 286 PANTHER LECTIN 1 286 - -
Mtr5g1284 286 PANTHER CONCANAVALIN A-LIKE LECTIN FAMILY PROTEIN 1 286 - -
Mtr5g1284 286 CDD lectin_legume_LecRK_Arcelin_ConA 47 286 IPR001220 GO:0030246
Mtr5g1284 286 PIRSF Plant_L_lectin 17 286 IPR016363 GO:0030246
Mtr5g1284 286 Gene3D - 44 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1284 Mtr-Chr5 13256660 13257520 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g1284 46 286 Receptor kinase-like Gene Family AT5G10530 34.553 5.33e-32 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1284 - - gmx:100780546 339.347
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g1284 5 13256660 13257520 Mtr8g2085 8 30811968 30812756 PCT
Mtr8g2084 8 30808703 30809744 Mtr5g1284 5 13256660 13257520 PCT