Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1275 ATGATGGAGTTACAAGTTATTAGGATATTTAGATTGGTTGTGGCATTTGTTCTTTGTTTGTGTATATTTATCAGATCAGCTTCTTCTGCAACTAAAGGGTTTGAGAGCATAGCATGTTGTGCTGATTCAAATTACACAGATCCAAAAACCACCCTAACTTATACAACAGATCACATCTGGTTCTCTGATAAAAGAAGTTGCAGACAAATACCCGAAATTTTGTTTAGCCACAGAAGCAATAAAAATGTTCGAAAATTTGAAATATATGAAGGAAAGAGATGTTATAATTTGCCAACAGTTAAGGATCAAGTATATTTGATAAGGGGCATATTTCCCTTTGATAGTTTAAATTCTTCGTTTTATGTTTCGATCGGGGTAACAGAACTAGGCGAATTAAGATCGTCTAGGCTCGAGGACTTGGAAATTGAGGGAGTTTTTAGAGCCACCAAAGACTACATAGATTTCTGCTTATTGAAGGAGGATGTCAATCCCTTCATTTCTCAGATTGAATTGAGGCCATTACCTGAAGAATACCTACATGGTTTCGGTACTAGTGTTTTAAAACTGATAAGCAGAAACAATCTTGGTGACACAAATGATGATATAAGGTTCCCAGATGACCAAAATGATAGAATCTGGAAACGGAAAGAAACTTCAACTCCAACATCTGCCCTTCCACTGTCTTTCAATGTCAGCAATGTTGACCTCAAAGACAGTGTCACACCTCCTCTACAAGTCCTACAAACAGCTCTTACTCACCCTGAGCGATTGGAGTTCGTCCATGATGGCCTCGAGACCGATGATTATGAATACTCTGTGTTTCTCCACTTTCTTGAACTAAATGGCACTGTCAGAGCAGGACAAAGGGTGTTTGACATCTATCTAAACAATGAGATTAAAAAGGAGAAATTTGATGTTTTGGCTGGAGGGTCCAAGAACAGTTACACTGCCTTGAACATTTCAGCAAATGGATCACTCAATATAACCTTAGTCAAGGCATCTGGATCTGAGTTTGGACCCCTTTTGAATGCCTATGAAATCCTGCAGGCACGGTCGTGGATTGAAGAGACCAACCAAAAAGATTTGGAAGTTATTCAGAAGATGAGAGAAGAACTGCTGCTGCACAACCAAGAAAATGAAGCATTGGAGAGTTGGAGTGGAGACCCTTGTATGATTTTCCCCTGGAAAGGAATAACATGTGATGATTCAACTGGTTCATCTATTATCACTAAGCTGGATCTTTCTTCCAATAATCTCAAGGGAGCAATTCCTTCCATTGTCACTAAGATGACCAATTTACAAATACTGAACCTGAGCCACAACCAGTTCGATATGTTATTCCCCTCGTTTCCACCGTCCTCCTTGCTGATATCATTGGATCTTAGCTACAATGATCTTTCAGGATGGCTTCCAGAATCCATTATCTCACTGCCACATTTAAAATCATTATATTTTGGCTGCAATCCATCTATGAGTGACGAAGATACAACAAAGTTGAACAGTTCACTAATCAATACAGATTATGGGAGATGCAAAGCAAAAAAACCAAAGTTTGGACAAGTATTCGTGATTGGAGCTATTACAAGTGGATCACTTTTGATTACTTTGGCTGTTGGAATTCTATTTTTTTGCCGTTATAGACACAAGTCAATTACTTTGGAAGGATTTGGAAAGACCTACCCAATGGCAACAAATATAATTTTCTCTTTGCCAAGCAAAGACGATTTCTTCATAAAGTCTGTATCAGTTAAACCGTTCACTTTGGAGTATATAGAGCAGGCTACAGAACAGTACAAAACTTTAATAGGTGAAGGAGGATTTGGCTCTGTTTACAGGGGCACTCTAGACGATGGTCAAGAAGTGGCAGTGAAAGTGCGGTCATCCACATCAACTCAGGGAACCCGAGAATTTGATAATGAGCTAAACCTACTTTCAGCTATACAACATGAGAACCTGGTGCCTCTTCTGGGTTACTGTAATGAGTATGATCAACAAATTCTCGTGTATCCTTTCATGTCCAATGGCTCTTTGCTAGATAGACTATACGGGGAAGCATCAAAGAGAAAAATATTAGACTGGCCAACTAGACTCTCTATTGCTCTCGGTGCAGCTCGAGGTTTGGCATATCTTCACACATTTCCAGGACGTTCTGTAATACACAGGGACGTAAAATCGAGCAATATACTGCTGGATCAGAGCATGTGTGCTAAGGTTGCAGATTTTGGTTTCTCAAAATATGCTCCTCAGGAAGGAGACAGTTATGTTTCCCTTGAAGTAAGAGGAACTGCAGGGTATCTGGATCCTGAGTACTACAAAACCCAGCAATTATCTGAAAAAAGTGATGTTTTCAGCTTTGGTGTGGTTCTTCTTGAAATTGTAAGCGGACGGGAACCTCTCAACATAAAGAGACCAAGGATCGAGTGGAGCTTGGTTGAATGGGCTAAACCATACATAAGAGCATCAAAGGTGGATGAAATTGTAGATCCTGGCATCAAGGGAGGATATCATGCAGAGGCATTGTGGAGAGTTGTGGAAGTAGCACTACAATGTCTAGAACCCTACTCAACATATCGGCCATGCATGGTTGATATTGTCCGCGAGTTGGAGGATGCTCTCATTATTGAAAACAATGCATCTGAATACATGAAATCCATAGACAGCCTTGGAGGATCCAACCGCTACTCAATTGTTATGGACAAACGGGCGCTGCCTTCAACTACATCTACAGCAGAATCAACTATCACAACCCAAACCTTGTCACACCCTCAACCGAGATAG 2778 0.4032 MMELQVIRIFRLVVAFVLCLCIFIRSASSATKGFESIACCADSNYTDPKTTLTYTTDHIWFSDKRSCRQIPEILFSHRSNKNVRKFEIYEGKRCYNLPTVKDQVYLIRGIFPFDSLNSSFYVSIGVTELGELRSSRLEDLEIEGVFRATKDYIDFCLLKEDVNPFISQIELRPLPEEYLHGFGTSVLKLISRNNLGDTNDDIRFPDDQNDRIWKRKETSTPTSALPLSFNVSNVDLKDSVTPPLQVLQTALTHPERLEFVHDGLETDDYEYSVFLHFLELNGTVRAGQRVFDIYLNNEIKKEKFDVLAGGSKNSYTALNISANGSLNITLVKASGSEFGPLLNAYEILQARSWIEETNQKDLEVIQKMREELLLHNQENEALESWSGDPCMIFPWKGITCDDSTGSSIITKLDLSSNNLKGAIPSIVTKMTNLQILNLSHNQFDMLFPSFPPSSLLISLDLSYNDLSGWLPESIISLPHLKSLYFGCNPSMSDEDTTKLNSSLINTDYGRCKAKKPKFGQVFVIGAITSGSLLITLAVGILFFCRYRHKSITLEGFGKTYPMATNIIFSLPSKDDFFIKSVSVKPFTLEYIEQATEQYKTLIGEGGFGSVYRGTLDDGQEVAVKVRSSTSTQGTREFDNELNLLSAIQHENLVPLLGYCNEYDQQILVYPFMSNGSLLDRLYGEASKRKILDWPTRLSIALGAARGLAYLHTFPGRSVIHRDVKSSNILLDQSMCAKVADFGFSKYAPQEGDSYVSLEVRGTAGYLDPEYYKTQQLSEKSDVFSFGVVLLEIVSGREPLNIKRPRIEWSLVEWAKPYIRASKVDEIVDPGIKGGYHAEALWRVVEVALQCLEPYSTYRPCMVDIVRELEDALIIENNASEYMKSIDSLGGSNRYSIVMDKRALPSTTSTAESTITTQTLSHPQPR* 926
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1275 925 PANTHER OS05G0525400 PROTEIN 63 886 - -
Mtr5g1275 925 Pfam Malectin-like domain 41 348 IPR024788 -
Mtr5g1275 925 Gene3D Phosphorylase Kinase; domain 1 569 671 - -
Mtr5g1275 925 SUPERFAMILY L domain-like 381 491 - -
Mtr5g1275 925 Gene3D Transferase(Phosphotransferase) domain 1 672 888 - -
Mtr5g1275 925 ProSitePatterns Serine/Threonine protein kinases active-site signature. 718 730 IPR008271 GO:0004672|GO:0006468
Mtr5g1275 925 PANTHER OS07G0107800 PROTEIN-RELATED 63 886 - -
Mtr5g1275 925 ProSiteProfiles Protein kinase domain profile. 596 873 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g1275 925 ProSitePatterns Protein kinases ATP-binding region signature. 602 624 IPR017441 GO:0005524
Mtr5g1275 925 Pfam Leucine rich repeat N-terminal domain 359 401 IPR013210 -
Mtr5g1275 925 Pfam Protein tyrosine and serine/threonine kinase 599 868 IPR001245 GO:0004672|GO:0006468
Mtr5g1275 925 Gene3D - 188 352 - -
Mtr5g1275 925 SUPERFAMILY Protein kinase-like (PK-like) 576 868 IPR011009 -
Mtr5g1275 925 SMART serkin_6 596 873 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g1275 925 Gene3D Ribonuclease Inhibitor 359 512 IPR032675 -
Mtr5g1275 925 CDD STKc_IRAK 602 869 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1275 Mtr-Chr5 13152795 13160402 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g1275 12 875 Receptor kinase-like Gene Family AT1G67720 33.591 6.98e-134 423
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Mtr5g1275 Malectin_like 1.8e-46 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1275 - - gmx:100781986 1427.15