Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1258 ATGGGAGACGTGGCTAAGGACCTTACTGCTGGAACTATTGGAGGGGCAGCACAACTGATAGTTGGTCATCCATTTGACACCATAAAGGTCAAGCTCCAAAGCCAGCCTACACCACTTCCTGGTCAGGTTCCGAAATATTCCGGTGCAATTGATGCTGTCAAGAAGACAATAGCAGCTGAAGGTCCTGGCGGATTATACAAAGGTATGGGAGCACCACTTGCTACAGTAGCTGCCTTCAATGCTGTCCTGTTTACAGTTAGAGGGCAAATGGAAGCATTGTTGAAGTCACATCCTGGTGATGTCCTCACAATAAATCAGCAGCTTGTTTGTGGAGCTGCAGCTGGACTTTCTGTTTCCTTTCTAGCTTGCCCTACTGAACTTATCAAATGCAGGTTACAAGCACAAAGTGCACTAGCTGGATCAGGAACAGCAACATTGGCAGTGAAATACGGTGGACCGATGGATGTAGCTAGACATGTTCTCAAATCAGAAGGTGGCGTAAAAGGTCTTTTCAAGGGGTTAGTTCCCACTATGGCGCGTGAAATACCTGGAAATGCCGCAATGTTTGGTGTATATGAAGCAACAAAGCAATTAATTGCAGGAGGCACCGATACCTCTGAACTCGGTAGAGGTTCTCTGATGCTTTCTGGAGGCTTGGCCGGAGCTGCTTTTTGGTTTATGGTGTATCCAACTGATGTTATTAAGAGTGTGATTCAAGTTGATGATTACAAAAATCCAAAATTTTCTGGTTCAATTGATGCTTTCAGAAGGATAAAAGCTACAGAAGGGTTTAAAGGTCTTTATAAGGGTTTTGGTCCTGCAATGTGCAGAAGTGTTCCTGCTAATGCAGCATGTTTCTTGGCATATGAGATGACAAGATCAGCTTTAGGATGA 894 0.4452 MGDVAKDLTAGTIGGAAQLIVGHPFDTIKVKLQSQPTPLPGQVPKYSGAIDAVKKTIAAEGPGGLYKGMGAPLATVAAFNAVLFTVRGQMEALLKSHPGDVLTINQQLVCGAAAGLSVSFLACPTELIKCRLQAQSALAGSGTATLAVKYGGPMDVARHVLKSEGGVKGLFKGLVPTMAREIPGNAAMFGVYEATKQLIAGGTDTSELGRGSLMLSGGLAGAAFWFMVYPTDVIKSVIQVDDYKNPKFSGSIDAFRRIKATEGFKGLYKGFGPAMCRSVPANAACFLAYEMTRSALG* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1258 297 Gene3D Mitochondrial carrier domain 2 296 IPR023395 -
Mtr5g1258 297 PANTHER CARNITINE/ACYLCARNITINE CARRIER-LIKE PROTEIN 1 297 - -
Mtr5g1258 297 ProSiteProfiles Solute carrier (Solcar) repeat profile. 102 198 IPR018108 -
Mtr5g1258 297 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 1 297 - -
Mtr5g1258 297 SUPERFAMILY Mitochondrial carrier 3 290 IPR023395 -
Mtr5g1258 297 Pfam Mitochondrial carrier protein 4 96 IPR018108 -
Mtr5g1258 297 Pfam Mitochondrial carrier protein 214 296 IPR018108 -
Mtr5g1258 297 Pfam Mitochondrial carrier protein 104 200 IPR018108 -
Mtr5g1258 297 ProSiteProfiles Solute carrier (Solcar) repeat profile. 2 93 IPR018108 -
Mtr5g1258 297 ProSiteProfiles Solute carrier (Solcar) repeat profile. 208 295 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1258 Mtr-Chr5 12926560 12930870 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g1258 22 291 Antiporters AT1G79900 32.601 5.04e-39 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1258 K15109 - gmx:100781634 528.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g1258 5 12926560 12930870 Mtr5g1258 5 12926560 12930870 ECH