Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1252 ATGGGGACCTTATCCACCTTAAGGCCACCGGTGCGGCCATCACAACCACCACAATCAGCCACCGGATTCAACCAAGACACTCTCCAACAACGTCTTCAAGCTTTAATTGAAGGCGTAAAAGAAATCTGGACCTACGCTATCTTCTGGCAACCTTCTTATGACTATTCAGGTTCTTCGTTACTCGGTTGGGGTGACGGATACTATAAAGGCGAAGAAGACAAAACAAAAGTGAAGAAATCAATAGTTACTTCACCTGCTGAACAAGAACACCGAAGAAAAGTTCTCAGAGAACTTTATTCATTAATCTCCGGTAATCCAGTTACGGAAGAATCTCCTGTTGATGAAGAAGTTACTGATATGGAGTGGTTCTTTTTAGTTTCCATGACTCAGTCTTTTGTTAACGACGGTGGACTTCCTGGACAAGCTTATTTCAACTCAACTCCGGTGTGGCTGGTTGGCGGTGAGAATCTTGTCCTCTCGCACTGCGAGAGGGCGAGACAAGGTCAAGAACACGGTTTAGAGACGCTGGTGTGTGTACCGTCAGCGAACGGCGTTTTAGAGCTTGGATCGACCGAATTGATTTATCAAAACAATGATTTCATGGATAAAGTGAAGATGTTATTGGATTTCAATAATGATTTTGATTTTGGATCTTCTTCGCATAGTTCTTCTACAATAGCTCATCAAGGTGAGAATGTTACTGGGCCATAG 711 0.4332 MGTLSTLRPPVRPSQPPQSATGFNQDTLQQRLQALIEGVKEIWTYAIFWQPSYDYSGSSLLGWGDGYYKGEEDKTKVKKSIVTSPAEQEHRRKVLRELYSLISGNPVTEESPVDEEVTDMEWFFLVSMTQSFVNDGGLPGQAYFNSTPVWLVGGENLVLSHCERARQGQEHGLETLVCVPSANGVLELGSTELIYQNNDFMDKVKMLLDFNNDFDFGSSSHSSSTIAHQGENVTGP* 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1252 236 PANTHER TRANSCRIPTION FACTOR MYC2 19 221 - -
Mtr5g1252 236 PANTHER MYC 19 221 IPR045084 GO:0003700|GO:0006355
Mtr5g1252 236 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 28 206 IPR025610 -
Mtr5g1252 236 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1252 Mtr-Chr5 12866363 12867073 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g1252 21 211 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G32640 60.000 1.05e-79 249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1252 K13422 - gmx:100790168 291.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g1252 5 12866363 12867073 Mtr5g1252 5 12866363 12867073 ECH