Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mtr5g1226 | ATGGAATCCAAAGAAGGTGATGAGAGAAAAAAAGAACACAAAGTTTCTATGTTAAAGCTATTTTCTTTTGCTGACTCTTATGATTATGTCTTAATGTTTATTGGATCTATTGGAGCCATTGTTCATGGTGCTTCTGTTCCTATTTTCTTTATTTTCTTTGGAAAGTTGATCAATGTTATTGGCTTGGCTTATCTTTTCCCTAAGGAAGCCTCTCACAAAGTTGCCAAGTACTCATTGGATTTTGTGTATCTAAGTGTAGCAATATTATTTTCATCTTGGACAGAGGTGGCTTGTTGGATGCATACTGGAGAAAGACAAGCAGCAAAGATGAGAATGGCTTATTTAAAGTCTATGTTAAATCAAGATATAAGTTTATTTGATACTGAGGCATCCACTGGAGAGGTCATTTCTGCTATTACAAGTGACATTATTATTGTTCAAGATGCTCTATCAGAGAAGGTAGGGAACTTCTTGCACTACATAAGCAGATTCATTGCTGGATTTACAATTGGATTTGTGAGAGTGTGGCAGATTAGTTTAGTGACACTTTCAATTGTCCCAGCGATTGCCCTTGCTGGAGGTTGTTATGCATATGTTACTATTGGCCTTATTGCAAAAGTTAGAAAAGCATATGTCAGGGCTGGTGAAATTGCTGAAGAGGTCATAGGCAATGTCAGAACAGTTCAAGCATTTGCAGGAGAAGAAAGAGCAGTAAGATCATATAAAGCAGCTCTTATGAAAACTTACGTAAACGGTAGAAAAGCAGGATTAGCAAAGGGTCTTGGACTTGGCTCAATGCATTGTGTTCTGTTTCTATCTTGGGCTTTACTTGTTTGGTACACTAGTGTTGTTGTTCACAAGAACATTGCCAATGGTGGCGAGTCATTCACTACCATGCTCAACGTCGTCATCTCTGGCCTGTCACTTGGGCAGGCAGCACCAGATATCTCGGCATTTATCCGAGCAAAGGCAGCAGCTTATCCCATTTTTGAGATGATAGAGAGGGATACAGTGAGCAAAAAAAGCTCAAAAACTGGTCGAAAATTAAGCAAATTGGATGGTCATATCCAGTTTAACGATGTCTGTTTCAGTTATCCGTCTCGTCCAGATGTAGGAATCTTCACCAACCTAAATCTGGACATTCCTGCAGGGAAAATTGTAGCACTTGTGGGAGGAAGTGGTTCCGGAAAAAGCACTGTTGTATCGTTGATCGAACGTTTTTATGAACCAATTTCTGGTCAGATACTTTTAGACAAGAATGATATCAGGGAACTTGATCTCAAATGGCTTAGGCAACAAATTGGACTAGTTAATCAAGAACCTGCACTTTTTGCTACAAGCATCAAGGAGAATATTTTGTATGGGAAAGATGATGCTACTCTTGAAGAACTAAAACGTGCTGTAAAGCTTTCGGATGCTCAATCTTTCATCAACAACCTTCCCGAAAGATTAGACACTCAGGTTGGTGAGAGAGGGATACAACTATCAGGTGGACAGAAGCAAAGGATTGCGATATCTCGGGCGATCGTGAAGAATCCATCGATCCTTTTATTAGATGAAGCAACTAGTGCTTTGGATGCGGAGTCTGAGAAGAGTGTACAGGAGGCTCTCGATCGTGTCATGGTTGGAAGAACAACAATTGTAGTTGCACACAGACTTTCTACCATTAGGAATGCAGATGTTATAGCTGTTGTTCAAGGAGGGAGGATTGTGGAGACCGGTAACCATGAAAAACTCATGTCCAATCCAACTAGTGTTTATGCATCTCTTGTTCAACTCCAAGGAGCAAGTTCTTTGCAACGCCTTCCCTCGGTCGGTCCTAGCCTAGGACGCCAATCAAGCATAAGCTACTCAAGAGAATTATCACGTACTGGAACAAGCATCGGTGGTAGTTTTCGTTCGGACAAAGACTCGATTGGCCGTGTTGGTGGTGATGATGTAAGCAAGTCAAAGCATGTTTCAGCAAAAAGACTATATTCTATGATTGGTCCTGACTGGCCTTATGGATTTTTTGGGACCTTATGTGCATTTGTTGCTGGAGCACAAATGCCACTTTTTGCACTAGGAATCTCTCATGCTCTTGTCTCATATTATATGGATTGGGAGACAACGCAGCGCGAAGTTAGGAAAATTGCTTTCCTCTTCTGTGGAGGTGCAGTTATAACTATCACAGTCCATGCCATTGAACATCTTTTTTTCGGTATCATGGGCGAGCGACTTACCCTTCGCGTGCGAGAAATGATGTTTACTGCTATTTTGAAGAATGAAATAGGATGGTTTGATGAAACAACCAACACAAGTTCCATGCTTTCATCGCGTTTAGAGTCCGACGCAACTTTAATGCGAACAATAGTTGTTGATCGCTCGACAATTCTGTTACAGAATCTTGGTCTGGTTGTTGCTTCGTTTATTATTGCCTTCCTTTTGAACTGGAGAATAACACTTGTTGTCTTGGCCACATATCCTTTGATAATTAGTGGTCACATTAGTGAGAAACTTTTCATGAAAGGCTATGGTGGCAACTTGAGCAAAGCATATCTAAAAGCCAACATGCTTGCTGGCGAGGCTGTGAGCAACATACGCACTGTTGCTGCATTTTGTTCTGAAGAAAAGATTCTTGATCTATATGCTGACCAGCTCGTCGGTCCTTCCAAACATTCATTTCGGCGCGGCCAAATTGCCGGCTTATTCTATGGCATTTCTCAGTTCTTCATTTTCTCATCTTATGGCCTTGCCTTATGGTACGGATCTGTTTTGATGGGAAAGGAACTTGCTAGCTTTAAATCAGTTATGAAGTCATTTATGGTTTTGATTGTAACAGCACTTGCTATGGGGGAAACTTTGGCACTAGCACCAGATCTTTTGAAAGGGAACCAAATGGTTGCTTCAGTTTTTGAAGTAATGGATAGAAAGTCAGAAATTAAAGGTGATGCCGGAGAAGAGTTGAAGACAGTCGAGGGAACAATTGAGCTCAAAAGAATCAATTTCAGCTACCCTTCAAGGCCAGATGTTATTATTTTCAAGGATTTTAGTCTAAGAGTTCCTTCAGGCAAAAGTGTTGCCTTAGTGGGACAAAGTGGTTCTGGTAAAAGCTCTGTGATCTCACTTATACTCAGATTTTATGATCCAACATCAGGAAAGGTGTTAATTGATGGAAAAGACATCACAAGAATAAATCTAAAATCTCTTAGAAAACACATTGGTCTTGTACAACAAGAACCAGCACTTTTCGCTACATCAATTTACGAAAACATTCTTTATGGAAAGGAAGGTGCATCTGATTCAGAAGTAATTGAAGCAGCTAAGCTAGCAAATGCTCATAACTTCATAAGTGCACTTCCAGAAGGTTACTCAACCAAAGTAGGTGAAAGAGGTGTGCAACTATCTGGTGGACAAAGACAAAGGGTAGCCATTGCTAGAGCTGTTTTAAAGAATCCTGAAATATTGCTTCTAGATGAAGCAACTAGTGCACTTGATGTCGAATCGGAGCGTATTGTACAACAAGCTCTTGACCGATTGATGCAGAATAGAACAACAGTTATGGTGGCACATAGGTTGTCAACAATAAGGAATGCAGATCAAATCTCAGTTTTGCAAGATGGAAAGATTATTGAGCAAGGGACTCATTCAAGTCTTATAGAGAATAAAGATGGACCGTATTATAAATTAGTCAACCTTCAACAACAACAAAATCATCAATCATAG | 3705 | 0.4027 | MESKEGDERKKEHKVSMLKLFSFADSYDYVLMFIGSIGAIVHGASVPIFFIFFGKLINVIGLAYLFPKEASHKVAKYSLDFVYLSVAILFSSWTEVACWMHTGERQAAKMRMAYLKSMLNQDISLFDTEASTGEVISAITSDIIIVQDALSEKVGNFLHYISRFIAGFTIGFVRVWQISLVTLSIVPAIALAGGCYAYVTIGLIAKVRKAYVRAGEIAEEVIGNVRTVQAFAGEERAVRSYKAALMKTYVNGRKAGLAKGLGLGSMHCVLFLSWALLVWYTSVVVHKNIANGGESFTTMLNVVISGLSLGQAAPDISAFIRAKAAAYPIFEMIERDTVSKKSSKTGRKLSKLDGHIQFNDVCFSYPSRPDVGIFTNLNLDIPAGKIVALVGGSGSGKSTVVSLIERFYEPISGQILLDKNDIRELDLKWLRQQIGLVNQEPALFATSIKENILYGKDDATLEELKRAVKLSDAQSFINNLPERLDTQVGERGIQLSGGQKQRIAISRAIVKNPSILLLDEATSALDAESEKSVQEALDRVMVGRTTIVVAHRLSTIRNADVIAVVQGGRIVETGNHEKLMSNPTSVYASLVQLQGASSLQRLPSVGPSLGRQSSISYSRELSRTGTSIGGSFRSDKDSIGRVGGDDVSKSKHVSAKRLYSMIGPDWPYGFFGTLCAFVAGAQMPLFALGISHALVSYYMDWETTQREVRKIAFLFCGGAVITITVHAIEHLFFGIMGERLTLRVREMMFTAILKNEIGWFDETTNTSSMLSSRLESDATLMRTIVVDRSTILLQNLGLVVASFIIAFLLNWRITLVVLATYPLIISGHISEKLFMKGYGGNLSKAYLKANMLAGEAVSNIRTVAAFCSEEKILDLYADQLVGPSKHSFRRGQIAGLFYGISQFFIFSSYGLALWYGSVLMGKELASFKSVMKSFMVLIVTALAMGETLALAPDLLKGNQMVASVFEVMDRKSEIKGDAGEELKTVEGTIELKRINFSYPSRPDVIIFKDFSLRVPSGKSVALVGQSGSGKSSVISLILRFYDPTSGKVLIDGKDITRINLKSLRKHIGLVQQEPALFATSIYENILYGKEGASDSEVIEAAKLANAHNFISALPEGYSTKVGERGVQLSGGQRQRVAIARAVLKNPEILLLDEATSALDVESERIVQQALDRLMQNRTTVMVAHRLSTIRNADQISVLQDGKIIEQGTHSSLIENKDGPYYKLVNLQQQQNHQS* | 1235 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mtr5g1226 | 1234 | Pfam | ABC transporter | 375 | 523 | IPR003439 | GO:0005524 | |
Mtr5g1226 | 1234 | Pfam | ABC transporter | 1008 | 1156 | IPR003439 | GO:0005524 | |
Mtr5g1226 | 1234 | PANTHER | ATP-BINDING CASSETTE SUB-FAMILY B | 10 | 1230 | IPR039421 | - | |
Mtr5g1226 | 1234 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 982 | 1227 | IPR027417 | - | |
Mtr5g1226 | 1234 | PANTHER | ABC TRANSPORTER B FAMILY PROTEIN | 10 | 1230 | - | - | |
Mtr5g1226 | 1234 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 989 | 1225 | IPR003439 | GO:0005524 | |
Mtr5g1226 | 1234 | SMART | AAA_5 | 383 | 569 | IPR003593 | - | |
Mtr5g1226 | 1234 | SMART | AAA_5 | 1016 | 1202 | IPR003593 | - | |
Mtr5g1226 | 1234 | Gene3D | - | 979 | 1234 | IPR027417 | - | |
Mtr5g1226 | 1234 | SUPERFAMILY | ABC transporter transmembrane region | 20 | 326 | IPR036640 | GO:0005524|GO:0016021 | |
Mtr5g1226 | 1234 | Pfam | ABC transporter transmembrane region | 670 | 942 | IPR011527 | GO:0005524|GO:0016021|GO:0055085|GO:0140359 | |
Mtr5g1226 | 1234 | Pfam | ABC transporter transmembrane region | 32 | 304 | IPR011527 | GO:0005524|GO:0016021|GO:0055085|GO:0140359 | |
Mtr5g1226 | 1234 | Gene3D | ABC transporter type 1, transmembrane domain | 19 | 958 | IPR036640 | GO:0005524|GO:0016021 | |
Mtr5g1226 | 1234 | ProSitePatterns | ABC transporters family signature. | 1128 | 1142 | IPR017871 | GO:0005524 | |
Mtr5g1226 | 1234 | CDD | ABC_6TM_Pgp_ABCB1_D1_like | 32 | 329 | - | - | |
Mtr5g1226 | 1234 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 670 | 956 | IPR011527 | GO:0005524|GO:0016021|GO:0055085|GO:0140359 | |
Mtr5g1226 | 1234 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 348 | 594 | IPR027417 | - | |
Mtr5g1226 | 1234 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 356 | 592 | IPR003439 | GO:0005524 | |
Mtr5g1226 | 1234 | CDD | ABC_6TM_Pgp_ABCB1_D2_like | 659 | 974 | - | - | |
Mtr5g1226 | 1234 | CDD | ABC_MTABC3_MDL1_MDL2 | 989 | 1227 | - | - | |
Mtr5g1226 | 1234 | CDD | ABC_MTABC3_MDL1_MDL2 | 356 | 594 | - | - | |
Mtr5g1226 | 1234 | Gene3D | - | 346 | 605 | IPR027417 | - | |
Mtr5g1226 | 1234 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 33 | 321 | IPR011527 | GO:0005524|GO:0016021|GO:0055085|GO:0140359 | |
Mtr5g1226 | 1234 | SUPERFAMILY | ABC transporter transmembrane region | 656 | 973 | IPR036640 | GO:0005524|GO:0016021 | |
Mtr5g1226 | 1234 | ProSitePatterns | ABC transporters family signature. | 495 | 509 | IPR017871 | GO:0005524 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mtr5g1226 | Mtr-Chr5 | 12561975 | 12571395 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mtr5g1226 | 15 | 1233 | Calmodulin-binding Proteins | AT2G36910 | 50.643 | 0.0 | 1217 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mtr5g1226 | K05658 | - | gmx:100819045 | 2162.5 |