Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1221 ATGACATCGGTTATCAGAAGAAGACACGGGCAAGCTCTAAGGCTTTCATTACCTAAACCTCAAATTACACATTCTTCTCATAGTTTCCCTAACCAAACCCGCATGCCATCTTTGATTTCATCACCATCCTCTCATGGTATCAGAAGCCTCTCAGACCTTGAAAAAGTAGCAGTACTTGGCCATGGAAATGGTGGAATAGGGTACAGAGTTCATCACAAGAAGAGTAATTCATTTTATGCATTGAAAATTTTAAACTTTGATCAAGATGGTATTGCATTTCACCAACCACCAACATTTGAAGCTGAGATTCTCAAAAGAGTTGATTCTCCTTATATTGTAAGGTGTCATGCAGTTTGTTACATTCCAACATATGTAGCACCGACACTTCAGACTAAAGGCGTGTTTGGTGACCTTAGTTTTGTTATGGAATAAATGGAAGGAGGGTCATTGCATGATATCTTGCAACAGCATCACAGGCTTCCTGAGGAGGTGATTTGTGTATTGGCAAGGAATGCTTTGGAAGGGCTAAACTATTTGCATGGTATGAACATTGTTCATAGAGATATTAAACCTTCAAATTTGTTTCTGAATGAAAAAGGGGAGGTGAAAATAGCATATTTTGGAGTTAGTCATGTGATTGAAGGGATATTTGAAGCAAATGATATGAATAGTACATGTGCATACATGAGTTCAGAAAGATTTGATCTTGAAAGATGGGGTGGTGAAAAGGTAACGTTTGCTTACCTCACTATGCTAGAAATGGCGTCATAG 771 0.3839 MTSVIRRRHGQALRLSLPKPQITHSSHSFPNQTRMPSLISSPSSHGIRSLSDLEKVAVLGHGNGGIGYRVHHKKSNSFYALKILNFDQDGIAFHQPPTFEAEILKRVDSPYIVRCHAVCYIPTYVAPTLQTKGVFGDLSFVME*MEGGSLHDILQQHHRLPEEVICVLARNALEGLNYLHGMNIVHRDIKPSNLFLNEKGEVKIAYFGVSHVIEGIFEANDMNSTCAYMSSERFDLERWGGEKVTFAYLTMLEMAS* 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1221 255 ProSitePatterns Serine/Threonine protein kinases active-site signature. 183 195 IPR008271 GO:0004672|GO:0006468
Mtr5g1221 255 ProSiteProfiles Protein kinase domain profile. 53 255 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g1221 255 SUPERFAMILY Protein kinase-like (PK-like) 46 234 IPR011009 -
Mtr5g1221 255 Gene3D Phosphorylase Kinase; domain 1 21 128 - -
Mtr5g1221 255 SMART serkin_6 53 254 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g1221 255 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 4 241 IPR045269 GO:0004674|GO:0006914
Mtr5g1221 255 Pfam Protein kinase domain 54 233 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g1221 255 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE 10-LIKE 4 241 - -
Mtr5g1221 255 MobiDBLite consensus disorder prediction 21 43 - -
Mtr5g1221 255 Gene3D Transferase(Phosphotransferase) domain 1 146 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1221 Mtr-Chr5 12519993 12520960 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g1221 1 246 MAP Kinase Kinase Gene Family AT1G32320 45.565 1.20e-56 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Mtr5g1221 Pkinase 8.7e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1221 K20604 - mtr:MTR_5g029670 379.022