Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1211 ATGGAGTTATTTCCAGCACAACCAGATTTGTCTTTGCAAATTAGTCCTCCAAATACAAAACAAACAACAACAAGTAATTGGAAGAGAACAACAACAACAGAAGAAGAAATGGATTTGGGGTTTTGGAAAAGAGCTTTGGATTCAAGAAACTCTTTATCATCATCAATGGCTTCTTCTAAAACTGATAATTACTCTTTTGACCTCTCTCTTTCAAATCCAACAAAGCCTTTAGATTCAAACAACAACACTTCAAATAACCTCATTCATCATCATCACTTCCAAAATAGTGGAAATAATAATGCAAACAACCCTTATCAATCTTTTCATCAAAATAATTACTTTCAACACCCCCATCCCCAACCACTCTTTCAACACCACCAGCCACATCAACAACACCAAAGCTTAAGCCAAGAACTTGGTTTTCTTAGACCTATTAGAGGAATTCCTGTTTATCAAAACCCTCCTCCTTTGTCATTCCCTCAACTTCATAATCATAATCATAATCTAAATCATCTTCATATTTTAGATGGTACTACTACTACTACACCTTCTTCTATTTCTAACACCAACAACACAAGTTCAAGCCCTTTTCAATCACAAGCTTTGATGAGGTCAAGATTCTTGTCAAGATTCCCAGCAAAAAGAAGCATGAGAGCTCCAAGGATGCGTTGGACTACTACACTTCATGCTCGATTTGTTCATGCTGTTGAACTCTTAGGTGGCCATGAAAGAGCTACTCCAAAATCAGTTCTTGAACTAATGGATGTGAAGGATCTTACATTAGCACATGTCAAGTCTCACTTACAGATGTATCGGACGGTGAAAACTACAGATAGAGTAGGAGCTTCATCAGGGCAATCTGATGTATACGATAATGGATCATCTGGAGACAATTCTGATGACATAATGTTTGACATTAACTCTTCAAGAAGATCATCTGATTTATCCATTAAGCAGCAAGGAAGATCAAGTGTTAATCAAGATAAAGAATGTTATGGTCTTTGGAGCAACTCTTCCCGGGAAGCTTGGTTACATGGTAAACCAAAGGTTGATTCTATTGGAAACATGCAATCTCTTGAGAAGGAAATGGATCCAAAGTGTCTAAGCTATGAGAGAATATCAGATGGCAGTTCATCTACAAACCTATCAGGATCAAGCCCAAAGAAACCTAATTTGGATTTGGAATTCACCCTAGGCCAACCTCTTTGA 1209 0.3739 MELFPAQPDLSLQISPPNTKQTTTSNWKRTTTTEEEMDLGFWKRALDSRNSLSSSMASSKTDNYSFDLSLSNPTKPLDSNNNTSNNLIHHHHFQNSGNNNANNPYQSFHQNNYFQHPHPQPLFQHHQPHQQHQSLSQELGFLRPIRGIPVYQNPPPLSFPQLHNHNHNLNHLHILDGTTTTTPSSISNTNNTSSSPFQSQALMRSRFLSRFPAKRSMRAPRMRWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDRVGASSGQSDVYDNGSSGDNSDDIMFDINSSRRSSDLSIKQQGRSSVNQDKECYGLWSNSSREAWLHGKPKVDSIGNMQSLEKEMDPKCLSYERISDGSSSTNLSGSSPKKPNLDLEFTLGQPL* 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1211 402 Gene3D - 219 276 - -
Mtr5g1211 402 MobiDBLite consensus disorder prediction 364 402 - -
Mtr5g1211 402 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 1 401 IPR044847 GO:0000976|GO:0006355|GO:0010158
Mtr5g1211 402 MobiDBLite consensus disorder prediction 278 305 - -
Mtr5g1211 402 MobiDBLite consensus disorder prediction 1 27 - -
Mtr5g1211 402 MobiDBLite consensus disorder prediction 372 390 - -
Mtr5g1211 402 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 1 401 - -
Mtr5g1211 402 SUPERFAMILY Homeodomain-like 217 273 IPR009057 -
Mtr5g1211 402 MobiDBLite consensus disorder prediction 11 27 - -
Mtr5g1211 402 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 220 273 IPR006447 GO:0003677
Mtr5g1211 402 Pfam Myb-like DNA-binding domain 221 272 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1211 Mtr-Chr5 12391169 12397064 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g1211 1 401 G2-like Transcription Factor Family AT4G17695 39.089 1.62e-60 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Mtr5g1211 Myb_DNA-binding 2e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1211 - - aprc:113868756 507.294
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g1211 5 12391169 12397064 Mtr5g1211 5 12391169 12397064 ECH
Mtr5g1211 5 12391169 12397064 Mtr8g2031 8 30148794 30154287 PCT