Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1198 ATGGGTAATAGTGAAATGGATAAAACCACAAGAGAAAAGGAGTCGAAGACGCCGCCACCAACATCACAGGAGCAGCCTTCAACCACCACAAGCACCGGACAAGTTAATACTGACTGGGCCAGCTTTCAGGCATATTCTCCTATGCCTCCACATGGATTCATGGCGTCAAGTCCCCAAGCTCACCCTTATATGTGGGGTGTGCAGCACATGATGCCTCCTTATGGTACTCCACCACATCCCTATGTTGCAATGTATCCCCATGGTGGCATATATGCTCATCCATCCATGCCTCCGGGATCTTATCCATATCCTTATGCCATGCCTGCTCCAAACGGTATTGCTGAGGCTTCCGGAAACACTCCTGCCAGCATGGAAACTGATGGTAAACCTCCTGAAGTGAAGGAAAAATTGCCAATCAAAAGGTCAAAAGGAAGTTTAGGTAGTTTGAACATGATTACAGGGAAAAATAATGAACACGGTAAAACAGAGGGGACATCTGTTAATGGACTTCACTCAAAGAGTGGTGAAAGTGGAAGTTATGAAGGTACTAGTGAAGGAAGTGATGCAAATTCTCAGAATGGCTCTCAATTGAAATCGGGGGACAGGCTGGATTCTTTTGAAGGTGAACCATCTCAAAATGGCAGTTCAGTGCATACTTCACAAAATGGGGGACTTAATGCACCTCATACAGTGGTTAATCAAACTATGTCTATCCTTCCTATCTCGGCGAGTGGTGCTCCTGGAGCTGTTGCTGGCCCCACAACAAACTTAAATATAGGAATGGATTATTGGAACGCACCAAATTCATCCAACATTCCTGCTCTCCGCGGAAAGGTTCCGCCTACCACAGTTGCGGGAGCGGTGGTTACTGGTGGATCACGGGATAGTGTTCAGTCACAACTTTGGCTACAGGATGAAAGAGAGCTTAAAAGACAAAGGCGAAAGCAGTCTAATAGGGAATCTGCCCGGAGATCCAGGTTGCGCAAGCAGGCTGAGTGTGACGAGCTTGCTCAGCGTGCTGATGTTTTGAAAGAAGAAAATGCTTCGCTCCGATTAGAAGTAAATCGCATTAGAAGCGAGTATGATCAGCTACTTTCCGAGAATGCAGCTCTCAAGGAGAGACTTGGGGAACAACCAGGGAACGATCAACACATGTGTAACGACACTCAACAAAGTGGACATACAGAGGTTGTGCAGGATGGTCATTAG 1209 0.4665 MGNSEMDKTTREKESKTPPPTSQEQPSTTTSTGQVNTDWASFQAYSPMPPHGFMASSPQAHPYMWGVQHMMPPYGTPPHPYVAMYPHGGIYAHPSMPPGSYPYPYAMPAPNGIAEASGNTPASMETDGKPPEVKEKLPIKRSKGSLGSLNMITGKNNEHGKTEGTSVNGLHSKSGESGSYEGTSEGSDANSQNGSQLKSGDRLDSFEGEPSQNGSSVHTSQNGGLNAPHTVVNQTMSILPISASGAPGAVAGPTTNLNIGMDYWNAPNSSNIPALRGKVPPTTVAGAVVTGGSRDSVQSQLWLQDERELKRQRRKQSNRESARRSRLRKQAECDELAQRADVLKEENASLRLEVNRIRSEYDQLLSENAALKERLGEQPGNDQHMCNDTQQSGHTEVVQDGH* 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1198 402 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 400 IPR044827 GO:0003700|GO:0006355|GO:0043565
Mtr5g1198 402 SMART brlzneu 306 370 IPR004827 GO:0003700|GO:0006355
Mtr5g1198 402 MobiDBLite consensus disorder prediction 116 228 - -
Mtr5g1198 402 Gene3D - 309 363 - -
Mtr5g1198 402 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 313 328 IPR004827 GO:0003700|GO:0006355
Mtr5g1198 402 MobiDBLite consensus disorder prediction 1 43 - -
Mtr5g1198 402 SUPERFAMILY Leucine zipper domain 309 365 IPR046347 GO:0003700|GO:0006355
Mtr5g1198 402 PANTHER BZIP TRANSCRIPTION FACTOR FAMILY PROTEIN 1 400 - -
Mtr5g1198 402 MobiDBLite consensus disorder prediction 1 18 - -
Mtr5g1198 402 MobiDBLite consensus disorder prediction 146 228 - -
Mtr5g1198 402 Coils Coil 326 374 - -
Mtr5g1198 402 MobiDBLite consensus disorder prediction 19 43 - -
Mtr5g1198 402 MobiDBLite consensus disorder prediction 370 402 - -
Mtr5g1198 402 Pfam G-box binding protein MFMR 1 97 IPR012900 -
Mtr5g1198 402 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 308 371 IPR004827 GO:0003700|GO:0006355
Mtr5g1198 402 Pfam bZIP transcription factor 306 368 IPR004827 GO:0003700|GO:0006355
Mtr5g1198 402 Pfam Disordered region downstream of MFMR 135 273 - -
Mtr5g1198 402 MobiDBLite consensus disorder prediction 382 402 - -
Mtr5g1198 402 MobiDBLite consensus disorder prediction 308 329 - -
Mtr5g1198 402 CDD bZIP_plant_GBF1 311 362 IPR045314 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1198 Mtr-Chr5 12116201 12122913 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g1198 1 402 bZIP Transcription Factor Family AT2G35530 60.577 1.95e-161 458
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Mtr5g1198 MFMR_assoc 6.2e-58 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1198 K09060 - gmx:778122 622.083
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g1198 5 12116201 12122913 Mtr5g1198 5 12116201 12122913 ECH