Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1175 ATGGGTTACGAAGATAATCCGTATCGTGATGAAGACGGTGAACCGTTGATGGATTACGACGACGTACAATCCGACGGCGAAGGATCACCGGAGCCACAACAACTCGACGATTTCGAAGAAGAAGATGTCGACAATTTTCACGATCGTGCCCGGTCACAGACACCGGTTTACGAAAACGATTCGTCGAAATCAAAGCCGAGGAAACGCTTGATTAAGAAAAGTGATACCGGAAAACAGTCAATGGCGCTGCCATCGGAGCTCGAAGATGAATTGGAGGAGGAGGATGAAGGGAGGAAGAGGAAGAAGGGGAAGGATGGTGGGTCTGGGAAGAAGGAGAAGAGGCTGAAAGGGGGTAGTAGTAGTAGTGGAAAGGGTGGGTCTAGATTTGGTGGTTCTAAGAGAGGGGTTGGTGGGAAAAGTGGGAATGATCGTGAAGGTGAAGTTAATGAGATGTGGGATGCACTTGCTGGAAATTCTGAGGATGATAATGAAGGTGCCAGGAATATGGATGATGATAACTTTATAGACGACACTGGAGTAGAACCTGCTTTGTATGGTTACGATGAACCACGTTCTCCTGGCGATGCTCCACAGGCTGAGGAAGGTGAGGAAGATGATGAAATCAAGGATCTTTTCAAGATGGGGAAGAAAAAGAAGAAGAACGAGAGAAGTCCTGCAGAAATTGCTTTATTAGTTGAGAATGTTATGGCTGAGCTTGAGGTTACAGCAGAAGAGGATGCTGAGCTTAATCGGCAGCACAAGCCCGCAGTCAATAAACTCAAGAAGTTGCCTCTTCTTATAGAAGTTCTTTCAAAGAAACAACTTCAGCTTGAGTTTTTAGATCACGGAGTGCTAAATTTATTGAAGAGTTGGCTTGAGCCACTTCCTGATGGAAGTCTGCCAAATATCAACATACGAACAGCAATTTTGAAGATTTTGAATGATTTACCTATAGATCTAGAGCATTATGATAGAAGAGAACAGCTGAAGAGAAGTGGTCTTGGAAAGGTTATTATGTTTTTATCAAGGTCCGATGAAGAAATCAATGTAAATAGGAGATTAGCCAAGGATTTGGTTGATAAATGGAGCCGACCTATATTCAATAAGAGTACTCGGTTTGAAGACATGCGAAATACTGAGGATGATAGAGTTCCTTACAGGAGGCCATCGGTTAAAAAGCCAGCAGCTAAAGCTGCAGGGATGCAATCAAGAGACGGTGATCTTGATTTGGATCTTTCACAGCCTAGGTCCGGAGAGTCGTCTTCCAGGCAACATGCATCAAGGCCAGAAGCCACACCTTTGGATTTTGTGATCCGCCCCCAATCTAAAATTGACCCTGATGAAATCAGAGCACGTGCAAAACAAGCTACACAAGACCAGCATCGTATGAAGATGAATAAGAAATTGCAGCAGTTGAGGGCACCAAAAAAGAAGCAGCTTCAGGCTACAAAACTGAGTGTGGAAGGTCGTGGTATGGCCAAATACTTTTAA 1491 0.442 MGYEDNPYRDEDGEPLMDYDDVQSDGEGSPEPQQLDDFEEEDVDNFHDRARSQTPVYENDSSKSKPRKRLIKKSDTGKQSMALPSELEDELEEEDEGRKRKKGKDGGSGKKEKRLKGGSSSSGKGGSRFGGSKRGVGGKSGNDREGEVNEMWDALAGNSEDDNEGARNMDDDNFIDDTGVEPALYGYDEPRSPGDAPQAEEGEEDDEIKDLFKMGKKKKKNERSPAEIALLVENVMAELEVTAEEDAELNRQHKPAVNKLKKLPLLIEVLSKKQLQLEFLDHGVLNLLKSWLEPLPDGSLPNINIRTAILKILNDLPIDLEHYDRREQLKRSGLGKVIMFLSRSDEEINVNRRLAKDLVDKWSRPIFNKSTRFEDMRNTEDDRVPYRRPSVKKPAAKAAGMQSRDGDLDLDLSQPRSGESSSRQHASRPEATPLDFVIRPQSKIDPDEIRARAKQATQDQHRMKMNKKLQQLRAPKKKQLQATKLSVEGRGMAKYF* 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1175 496 MobiDBLite consensus disorder prediction 1 206 - -
Mtr5g1175 496 Coils Coil 232 252 - -
Mtr5g1175 496 PANTHER PROTEIN IWS1 HOMOLOG 1 1 495 IPR044204 GO:0009742|GO:0032784
Mtr5g1175 496 MobiDBLite consensus disorder prediction 441 466 - -
Mtr5g1175 496 PANTHER PROTEIN IWS1 HOMOLOG 1 1 495 - -
Mtr5g1175 496 ProSiteProfiles TFIIS N-terminal domain profile. 286 369 IPR017923 -
Mtr5g1175 496 Pfam TFIIS helical bundle-like domain 311 366 IPR017923 -
Mtr5g1175 496 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 225 372 IPR035441 -
Mtr5g1175 496 MobiDBLite consensus disorder prediction 378 482 - -
Mtr5g1175 496 MobiDBLite consensus disorder prediction 414 428 - -
Mtr5g1175 496 MobiDBLite consensus disorder prediction 94 118 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Mtr5g1175 Med26 3.8e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1175 K17498 - gmx:100801805 732.25